RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TFDP2Q14188 446 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 OR6B2Q6IFH4 312 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ALKBH5Q6P6C2 394 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 GAS2L3Q86XJ1 694 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.88□□□□□ -1.632e-7■■■■■ 50.8
CHD9-221ENST00000615216 PPCSQ9HAB8 311 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ABCB6Q9NP58 842 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SAYSD1Q9NPB0 183 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 TADA3O75528 432 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZMYND10O75800 440 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 KIF19Q2TAC6 998 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZNF667Q5HYK9 610 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 KIRREL3Q8IZU9 778 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 MTRQ99707 1265 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 AP1M1Q9BXS5 423 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 WDR70Q9NW82 654 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 TBK1Q9UHD2 729 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ERBB3P21860 1342 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 K7ERI5 159 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 USP17L8P0C7I0 530 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 IFNA8P32881 189 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 IL1RL1Q01638 556 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 TBCCQ15814 346 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 DDX17Q92841 729 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 GRAMD1AQ96CP6 724 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 CEP19Q96LK0 163 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PPP1R2P1Q96PQ5 205 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 FSD1LQ9BXM9 530 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 EML4Q9HC35 981 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 DNAJC17Q9NVM6 304 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 NEDD4P46934 1319 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 COBLO75128 1261 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SERPINB2P05120 415 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PPP2R2AP63151 447 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 KRT76Q01546 638 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZBTB33Q86T24 672 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 DCLK2Q8N568 766 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 XXYLT1Q8NBI6 393 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 TTC8Q8TAM2 541 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PITPNM3Q9BZ71 974 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZWILCHQ9H900 591 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 HPCAL4Q9UM19 191 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 BCS1LQ9Y276 419 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 L3MBTL1Q9Y468 752 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SNX2O60749 519 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 GPC3P51654 580 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PTPN12Q05209 780 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 MTMR1Q13613 665 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 BBS9Q3SYG4 887 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 MTERF2Q49AM1 385 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 COA7Q96BR5 231 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 CHMP6Q96FZ7 201 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 FGD4Q96M96 766 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 OLFM3Q96PB7 478 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 OSBPL9Q96SU4 736 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 POLR3CQ9BUI4 534 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 ANAPC7Q9UJX3 599 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 A0A1W2PQC6 194 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KIAA0391O15091 583 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 ASNSP08243 561 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 MCAMP43121 646 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 COPS2P61201 443 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 TMPRSS15P98073 1019 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 OCRLQ01968 901 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 TSTA3Q13630 321 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 TOB2Q14106 344 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 MMS22LQ6ZRQ5 1243 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 FRMD5Q7Z6J6 570 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 CDKL3Q8IVW4 592 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 LRRC43Q8N309 656 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ELMOD1Q8N336 334 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 TAB3Q8N5C8 712 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 TMEM35BQ8NCS4 154 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 MCUQ8NE86 351 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 LY9Q9HBG7 655 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 TOPORSQ9NS56 1045 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 MRGBPQ9NV56 204 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SENP1Q9P0U3 644 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 NXF1Q9UBU9 619 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 DNAJC5BQ9UF47 199 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 HNRNPCL2B2RXH8 293 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 GYG2O15488 501 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SLCO1A2P46721 670 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 MAPRE2Q15555 327 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KIAA1841Q6NSI8 718 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 USP17L2Q6R6M4 530 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 N4BP2L2Q92802 583 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 DNAJC12Q9UKB3 198 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ASAP1Q9ULH1 1129 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 CPDO75976 1380 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KDM6AO15550 1401 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 RASA4BC9J798 803 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 RASA4O43374 803 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 CD2BP2O95400 341 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 SLC16A2P36021 539 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SLC7A5Q01650 507 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KNOP1Q1ED39 458 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 TADA2BQ86TJ2 420 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms