RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GRAMD1AQ96CP6 724 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 ABCB11O95342 1321 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SLC26A4O43511 780 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 GYS2P54840 703 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 TMPRSS15P98073 1019 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 UBE2SQ16763 222 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 ARHGAP27Q6ZUM4 889 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SPDYE1Q8NFV5 336 aaPredicted RBP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 OLFM3Q96PB7 478 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 C2orf40Q9H1Z8 148 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 KIF9Q9HAQ2 790 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 CAPN11Q9UMQ6 739 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 CD58P19256 250 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 TAP1Q03518 808 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 FEM1BQ9UK73 627 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 FIS1Q9Y3D6 152 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 NPHP4O75161 1426 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 ERBB3P21860 1342 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 CFAP73A6NFT4 308 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 PTPN21Q16825 1174 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 KIAA1841Q6NSI8 718 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 THEM5Q8N1Q8 247 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 LOC102724159A0A0B4J2E5 919 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 A0A1W2PQC6 194 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 PWP2Q15269 919 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 KYAT1Q16773 422 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 GNAT1P11488 350 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 TRMT10CQ7L0Y3 403 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
HMGXB3-206ENST00000613459 CDHR2Q9BYE9 1310 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 ASAP2O43150 1006 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 LARGE1O95461 756 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 PDCLQ13371 301 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 C16orf87Q6PH81 154 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 DSTYKQ6XUX3 929 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 PARD3BQ8TEW8 1205 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 ANAPC7Q9UJX3 599 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 KRT7P08729 469 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 GGCXP38435 758 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 YWHAHQ04917 246 aaPredicted RBP18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 IP6K2Q9UHH9 426 aa18.58■□□□□ 0.57
HMGXB3-206ENST00000613459 FDX1P10109 184 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 SLC12A1Q13621 1099 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 TRIM62Q9BVG3 475 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 PCDHA6Q9UN73 950 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 PCDHA8Q9Y5H6 950 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 GMNCA6NCL1 334 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 ZBBXA8MT70 800 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 ACSL3O95573 720 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 CTTNQ14247 550 aaKnown RBP18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 CYTH2Q99418 400 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 TARSL2A2RTX5 802 aaKnown RBP18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 PHKA2P46019 1235 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 AP2B1P63010 937 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 PPP2R2AP63151 447 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 TEX12Q9BXU0 123 aa18.58■□□□□ 0.56
HMGXB3-206ENST00000613459 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 EPM2AIP1Q7L775 607 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 CEP70Q8NHQ1 597 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 PRDM15P57071 1507 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 A0A0G2JND7 137 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 RASA4BC9J798 803 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 RASA4O43374 803 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 SRGAP2CP0DJJ0 459 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 SAMD9LQ8IVG5 1584 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 KDM6BO15054 1643 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 GOLGA8MH3BSY2 632 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 MAN1A2O60476 641 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 ATP1A3P13637 1013 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 PMS2P54278 862 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 PEX3P56589 373 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 HDLBPQ00341 1268 aaKnown RBP18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 GRM4Q14833 912 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 PODNQ7Z5L7 613 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 PARP9Q8IXQ6 854 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 DYNLL2Q96FJ2 89 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 LRRC37BQ96QE4 947 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 PPP1R12AO14974 1030 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 HNRNPCL1O60812 293 aaKnown RBP18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 KIRREL3Q8IZU9 778 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 MTBPQ96DY7 904 aa18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.563e-7■■■□□ 16
HMGXB3-206ENST00000613459 PPARGC1AQ9UBK2 798 aaKnown RBP18.57■□□□□ 0.56
HMGXB3-206ENST00000613459 TMCC1O94876 653 aa18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 DHX34Q14147 1143 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 BEND6Q5SZJ8 279 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 ITPRIPL1Q6GPH6 555 aa18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 ZFXP17010 805 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 TOB2Q14106 344 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 CLEC17AQ6ZS10 378 aa18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 CDKL3Q8IVW4 592 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 TRIM45Q9H8W5 580 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 ZWILCHQ9H900 591 aa18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 KIF1BO60333 1816 aa18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 KIAA0391O15091 583 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 KIF1CO43896 1103 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 COPS2P61201 443 aa18.56■□□□□ 0.56
HMGXB3-206ENST00000613459 NAALADL2Q58DX5 795 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms