RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 C9IYK1 514 aa24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 DARSP14868 501 aaKnown RBP24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 SARSP49591 514 aaKnown RBP24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 MCM2P49736 904 aa24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 TPH2Q8IWU9 490 aa24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 TMEM192Q8IY95 271 aa24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 SAMD11Q96NU1 681 aa24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 SUCLA2Q9P2R7 463 aaPredicted RBP24.98■■□□□ 1.59
GTF2F1-204ENST00000594965 UNC80Q8N2C7 3258 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 LYPLA2O95372 231 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 GATMP50440 423 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 TOB1P50616 345 aaPredicted RBP24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 ORC2Q13416 577 aaPredicted RBP24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 NBR1Q14596 966 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 TTC38Q5R3I4 469 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 NLRP7Q8WX94 980 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 C1orf112Q9NSG2 853 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 PPME1Q9Y570 386 aa24.97■■□□□ 1.59
GTF2F1-204ENST00000594965 A0A087WZ62 844 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 DENND3A2RUS2 1198 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 CSDE1O75534 798 aaKnown RBP24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 STAG3L1P0CL83 205 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 FGFR4P22455 802 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 GJB2P29033 226 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 TRAPPC10P48553 1259 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 DNM2P50570 870 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 FAM189BP81408 668 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 GNL2Q13823 731 aaKnown RBP24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 BTG3Q14201 252 aaPredicted RBP24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 SLC24A5Q71RS6 500 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 RHPN2Q8IUC4 686 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 KSR1Q8IVT5 923 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 C4orf32Q8N8J7 132 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 NEK9Q8TD19 979 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 JPH2Q9BR39 696 aaPredicted RBP24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 FDXACB1Q9BRP7 624 aaPredicted RBP24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 LMCD1Q9NZU5 365 aa24.96■■□□□ 1.59
GTF2F1-204ENST00000594965 H3BNC9 293 aa24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 OR52Z1P0C646 297 aa24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 CDC42EP1Q00587 391 aa24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 XKR9Q5GH70 373 aa24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 OTUD6AQ7L8S5 288 aa24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 CMTR2Q8IYT2 770 aaKnown RBP24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 CLP1Q92989 425 aaKnown RBP24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 BMP2KQ9NSY1 1161 aaPredicted RBP24.95■■□□□ 1.58
GTF2F1-204ENST00000594965 C5orf67F2Z3F1 127 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 SPATA31C1P0DKV0 1188 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 IBSPP21815 317 aaPredicted RBP24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 RFC5P40937 340 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 TECP42680 631 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 POLGP54098 1239 aaPredicted RBP24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 ZNF410Q86VK4 478 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 SLC7A3Q8WY07 619 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 TMEM143Q96AN5 459 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 SCLT1Q96NL6 688 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 GCOM2Q9BZD3 368 aaPredicted RBP24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 XPNPEP1Q9NQW7 623 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 LRFN2Q9ULH4 789 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 PCDHB7Q9Y5E2 793 aa24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 MRPL42Q9Y6G3 142 aaKnown RBP24.94■■□□□ 1.58
GTF2F1-204ENST00000594965 A0A087WWV3 80 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 BMPR1AP36894 532 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 GPM6BQ13491 265 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 EMC2Q15006 297 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 FAM102BQ5T8I3 360 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 IFT122Q9HBG6 1241 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 ANKEF1Q9NU02 776 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 NOL7Q9UMY1 257 aaKnown RBP24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 KIF3AQ9Y496 699 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 COL4A3BPQ9Y5P4 624 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 PLXNA4Q9HCM2 1894 aa24.93■■□□□ 1.58
GTF2F1-204ENST00000594965 MED24O75448 989 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 CTNNB1P35222 781 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 PAN2Q504Q3 1202 aaKnown RBP24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 CATSPER3Q86XQ3 398 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 EXOC8Q8IYI6 725 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 PRPF31Q8WWY3 499 aaKnown RBP24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 NLRP4Q96MN2 994 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 ELAC1Q9H777 363 aaKnown RBP24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 TMEM161AQ9NX61 479 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 PCDHB6Q9Y5E3 794 aa24.92■■□□□ 1.58
GTF2F1-204ENST00000594965 RB1P06400 928 aa24.91■■□□□ 1.58
GTF2F1-204ENST00000594965 RARRES1P49788 294 aa24.91■■□□□ 1.58
GTF2F1-204ENST00000594965 PIGOQ8TEQ8 1089 aa24.91■■□□□ 1.58
GTF2F1-204ENST00000594965 RNF19AQ9NV58 838 aa24.91■■□□□ 1.58
GTF2F1-204ENST00000594965 THEGQ9P2T0 379 aa24.91■■□□□ 1.58
GTF2F1-204ENST00000594965 RWDD3Q9Y3V2 267 aa24.91■■□□□ 1.58
GTF2F1-204ENST00000594965 ZSCAN20P17040 1043 aaPredicted RBP24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 LAMTOR4Q0VGL1 99 aa24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 FERMT3Q86UX7 667 aa24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 PSPC1Q8WXF1 523 aaKnown RBP24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 MTRQ99707 1265 aa24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 POLR3CQ9BUI4 534 aaPredicted RBP24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 TUFT1Q9NNX1 390 aa24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 SMC3Q9UQE7 1217 aa24.9■■□□□ 1.58
GTF2F1-204ENST00000594965 GAS2O43903 313 aaKnown RBP24.89■■□□□ 1.58
GTF2F1-204ENST00000594965 FGFR1P11362 822 aa24.89■■□□□ 1.58
GTF2F1-204ENST00000594965 XRCC6P12956 609 aaKnown RBP eCLIP24.89■■□□□ 1.58
GTF2F1-204ENST00000594965 CUL4AQ13619 759 aa24.89■■□□□ 1.58
GTF2F1-204ENST00000594965 ECHDC2Q86YB7 292 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms