RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SH3RF1Q7Z6J0 888 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 FAM126BQ8IXS8 530 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 PDILTQ8N807 584 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 DIS3LQ8TF46 1054 aaKnown RBP11.56□□□□□ -0.56
CCDC47-203ENST00000580986 TCP11Q8WWU5 503 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 VTI1AQ96AJ9 217 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 DHX58Q96C10 678 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 ATP6V0A4Q9HBG4 840 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 SETD4Q9NVD3 440 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
CCDC47-203ENST00000580986 TLR3O15455 904 aaKnown RBP11.55□□□□□ -0.56
CCDC47-203ENST00000580986 KINO60870 393 aaKnown RBP11.55□□□□□ -0.56
CCDC47-203ENST00000580986 NR1I2O75469 434 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 LIG1P18858 919 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 KLRC1P26715 233 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 DNM2P50570 870 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 ZNF131P52739 623 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 POU5F1BQ06416 359 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 EMC2Q15006 297 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 ZRSR1Q15695 479 aaKnown RBP11.55□□□□□ -0.56
CCDC47-203ENST00000580986 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 IER5Q5VY09 327 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 NME8Q8N427 588 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 CNNM3Q8NE01 707 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 CAGE1Q8TC20 777 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 KIFAP3Q92845 792 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 DRC1Q96MC2 740 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 MTRQ99707 1265 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 C7orf25Q9BPX7 421 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 TRIM9Q9C026 710 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 XPNPEP1Q9NQW7 623 aa11.55□□□□□ -0.56
CCDC47-203ENST00000580986 HOOK1Q9UJC3 728 aaKnown RBP11.55□□□□□ -0.56
CCDC47-203ENST00000580986 FRMD3A2A2Y4 597 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 TMEM150BA6NC51 233 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 DCDC2CA8MYV0 355 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 ASAP2O43150 1006 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 TREHO43280 583 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 B4GALT4O60513 344 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 USO1O60763 962 aaKnown RBP11.54□□□□□ -0.56
CCDC47-203ENST00000580986 HIC1Q14526 733 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 MCM6Q14566 821 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 MXD4Q14582 209 aaPredicted RBP11.54□□□□□ -0.56
CCDC47-203ENST00000580986 PTGISQ16647 500 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 ARSHQ5FYA8 562 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 FAM47CQ5HY64 1035 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 RSPH3Q86UC2 560 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 GPBP1Q86WP2 473 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 PSPC1Q8WXF1 523 aaKnown RBP11.54□□□□□ -0.56
CCDC47-203ENST00000580986 PLIN2Q99541 437 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 RUSC1Q9BVN2 902 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 NFKBIZQ9BYH8 718 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 DACT1Q9NYF0 836 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 SEL1LQ9UBV2 794 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 SERTAD1Q9UHV2 236 aa11.54□□□□□ -0.56
CCDC47-203ENST00000580986 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 MYMKA6NI61 221 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 PARNO95453 639 aaKnown RBP11.53□□□□□ -0.56
CCDC47-203ENST00000580986 CYP2C9P11712 490 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 ABCD1P33897 745 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 ARL2P36404 184 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 IGBP1P78318 339 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 MDM2Q00987 491 aaPredicted RBP11.53□□□□□ -0.56
CCDC47-203ENST00000580986 MAPK7Q13164 816 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 GIT2Q14161 759 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 PPP2R5AQ15172 486 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 ZNF410Q86VK4 478 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 KIAA0319LQ8IZA0 1049 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 SLC17A8Q8NDX2 589 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 SPATA20Q8TB22 786 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 TRAPPC12Q8WVT3 735 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 DDX12PQ92771 950 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 DNAJC19Q96DA6 116 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 PAGE5Q96GU1 130 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 NTPCRQ9BSD7 190 aaKnown RBP11.53□□□□□ -0.56
CCDC47-203ENST00000580986 HTATIP2Q9BUP3 242 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 PANK2Q9BZ23 570 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 LARSQ9P2J5 1176 aaKnown RBP11.53□□□□□ -0.56
CCDC47-203ENST00000580986 SQORQ9Y6N5 450 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 TRIP12Q14669 1992 aaPredicted RBP11.53□□□□□ -0.56
CCDC47-203ENST00000580986 PHLPP2Q6ZVD8 1323 aa11.53□□□□□ -0.56
CCDC47-203ENST00000580986 EVPLQ92817 2033 aa11.52□□□□□ -0.56
CCDC47-203ENST00000580986 GTPBP6O43824 516 aaPredicted RBP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 SSBP05455 408 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 MAPTP10636 758 aaKnown RBP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 GAP43P17677 238 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 NAMPTP43490 491 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 EHHADHQ08426 723 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 FAAP100Q0VG06 881 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 BFSP2Q13515 415 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 POSTNQ15063 836 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 PCBP1Q15365 356 aaKnown RBP eCLIP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 TRIM71Q2Q1W2 868 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms