RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 KBTBD4Q9NVX7 518 aa12.88□□□□□ -0.35
YBX3-213ENST00000542641 KCND2Q9NZV8 630 aa12.88□□□□□ -0.35
YBX3-213ENST00000542641 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
YBX3-213ENST00000542641 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
YBX3-213ENST00000542641 CD4P01730 458 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 GUCY2CP25092 1073 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 AFMP43652 599 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 CLCN3P51790 818 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 PTK7Q13308 1070 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 FAM102BQ5T8I3 360 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 KIAA0319LQ8IZA0 1049 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 PAGE5Q96GU1 130 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 XPNPEP1Q9NQW7 623 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
YBX3-213ENST00000542641 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
YBX3-213ENST00000542641 WDR81Q562E7 1941 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 MYMKA6NI61 221 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 HIP1RO75146 1068 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 FAAP100Q0VG06 881 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 DRP2Q13474 957 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 IER5Q5VY09 327 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 DYMQ7RTS9 669 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 NME8Q8N427 588 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 LINC01465Q8N7H1 131 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
YBX3-213ENST00000542641 DDX12PQ92771 950 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 MAP7D2Q96T17 732 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 TIPINQ9BVW5 301 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 AKT3Q9Y243 479 aa12.86□□□□□ -0.35
YBX3-213ENST00000542641 MKI67P46013 3256 aaKnown RBP12.86□□□□□ -0.35
YBX3-213ENST00000542641 MBD3O95983 291 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 RPLP2P05387 115 aaKnown RBP12.85□□□□□ -0.35
YBX3-213ENST00000542641 CLTBP09497 229 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 PTMSP20962 102 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 ARL2P36404 184 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 THPOP40225 353 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 GIT2Q14161 759 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 RPAINQ86UA6 219 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 PSPC1Q8WXF1 523 aaKnown RBP12.85□□□□□ -0.35
YBX3-213ENST00000542641 KIFAP3Q92845 792 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 WNT8BQ93098 351 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 REEP2Q9BRK0 252 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
YBX3-213ENST00000542641 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 ZHX3Q9H4I2 956 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
YBX3-213ENST00000542641 ODF2LQ9ULJ1 636 aa12.85□□□□□ -0.35
YBX3-213ENST00000542641 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 ASAP2O43150 1006 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
YBX3-213ENST00000542641 FAM13AO94988 1023 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 VTNP04004 478 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 MYL1P05976 194 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 IDEP14735 1019 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 CASP1P29466 404 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 CDC42EP1Q00587 391 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 BFSP2Q13515 415 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 CUL4BQ13620 913 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
YBX3-213ENST00000542641 SH3RF1Q7Z6J0 888 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 RHPN2Q8IUC4 686 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 KSR1Q8IVT5 923 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 DAW1Q8N136 415 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 CCDC155Q8N6L0 562 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 DHX38Q92620 1227 aaKnown RBP12.84□□□□□ -0.35
YBX3-213ENST00000542641 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 IFT74Q96LB3 600 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 PRDM5Q9NQX1 630 aaPredicted RBP12.84□□□□□ -0.35
YBX3-213ENST00000542641 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
YBX3-213ENST00000542641 M0QZ92 97 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
YBX3-213ENST00000542641 EVI5O60447 810 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 CAND2O75155 1236 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 CTSHP09668 335 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 SRGAP2CP0DJJ0 459 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 CKBP12277 381 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 GLRA2P23416 452 aa12.83□□□□□ -0.36
YBX3-213ENST00000542641 NLRP11P59045 1033 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms