RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 USP17L3A6NCW0 530 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 USP17L4A6NCW7 530 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 GSTA1P08263 222 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 RFC1P35251 1148 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 SNX16P57768 344 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 GTF2IP78347 998 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 HLFQ16534 295 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 USP17L1Q7RTZ2 530 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 APLFQ8IW19 511 aaPredicted RBP18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 ISCA1Q9BUE6 129 aa18.47■□□□□ 0.55
HMGXB3-201ENST00000502717 ITIH4Q14624 930 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 SUSD4Q5VX71 490 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 RAPGEF5Q92565 580 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 ABTB1Q969K4 478 aaPredicted RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 AMNQ9BXJ7 453 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 SENP2Q9HC62 589 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 SAYSD1Q9NPB0 183 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 EIF4E1BA6NMX2 242 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 MEIS1O00470 390 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 STAM2O75886 525 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 GRM4Q14833 912 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 TRMT10CQ7L0Y3 403 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 SRBD1Q8N5C6 995 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 STAMBPL1Q96FJ0 436 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 TEKT3Q9BXF9 490 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 ATG16L1Q676U5 607 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 AENQ8WTP8 325 aaKnown RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 TEKT1Q969V4 418 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 ZNF512BQ96KM6 892 aaPredicted RBP18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 ACCSQ96QU6 501 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 WNT8AQ9H1J5 351 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 GGT7Q9UJ14 662 aa18.46■□□□□ 0.55
HMGXB3-201ENST00000502717 IQANK1A0A1B0GTG1 560 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 POLR2BP30876 1174 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 MXI1P50539 228 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ERFEQ4G0M1 354 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 SLC17A8Q8NDX2 589 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 CAPN6Q9Y6Q1 641 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 DUSP10Q9Y6W6 482 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 XDHP47989 1333 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 SPECC1L-ADORA2AF8WAN1 911 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 DLATP10515 647 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 KLK7P49862 253 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 USP11P51784 963 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 SP4Q02446 784 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 KNOP1Q1ED39 458 aaKnown RBP18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 DYNLL2Q96FJ2 89 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 MECOMQ03112 1051 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 FRMD5Q7Z6J6 570 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 PYROXD1Q8WU10 500 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 NACC1Q96RE7 527 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ROPN1BQ9BZX4 212 aaPredicted RBP18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ROPN1Q9HAT0 212 aaPredicted RBP18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 PITPNM2Q9BZ72 1349 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 FOXP2O15409 715 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 RASA3Q14644 834 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ANKRD20A4Q4UJ75 823 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ANKRD20A8PQ5CZ79 823 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ANKRD20A2Q5SQ80 823 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ANKRD20A1Q5TYW2 823 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 DDX42Q86XP3 938 aaKnown RBP eCLIP18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 TRIM51Q9BSJ1 452 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 EHD2Q9NZN4 543 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
HMGXB3-201ENST00000502717 ORC4O43929 436 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 KLRC1P26715 233 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 TOB1P50616 345 aaPredicted RBP18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 FAM102BQ5T8I3 360 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 CYTH2Q99418 400 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 IFT122Q9HBG6 1241 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 IGF2BP3O00425 579 aaKnown RBP eCLIP18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 TTLL1O95922 423 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 GHRP10912 638 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 FGFR4P22455 802 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 MAML1Q92585 1016 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 SYF2O95926 243 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 ESRRGP62508 458 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 EZH2Q15910 746 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 YTHDF3Q7Z739 585 aaKnown RBP18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 SNF8Q96H20 258 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 PCDHA6Q9UN73 950 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 PCDHA8Q9Y5H6 950 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 PNMA6FA0A0J9YX94 578 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 RANBP1P43487 201 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 COPS2P61201 443 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 KAZALD1Q96I82 304 aa18.44■□□□□ 0.54
HMGXB3-201ENST00000502717 ANP32DO95626 131 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 AP2B1P63010 937 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 STAT4Q14765 748 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 PDCD2Q16342 344 aaPredicted RBP18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 TAB3Q8N5C8 712 aaPredicted RBP18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 DYDC2Q96IM9 177 aa18.43■□□□□ 0.54
HMGXB3-201ENST00000502717 SENP1Q9P0U3 644 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms