RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 TXNRD2Q9NNW7 524 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNHIT6Q9NWK9 470 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 BTBD7Q9P203 1132 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 PNMA2Q9UL42 364 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 SYNRGQ9UMZ2 1314 aa12.51□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCT8L1PA6NM43 557 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 LINGO3P0C6S8 592 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 COPB2P35606 906 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 TSR1Q2NL82 804 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 ARHGAP22Q7Z5H3 698 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 NCAPG2Q86XI2 1143 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CREG2Q8IUH2 290 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 MIPOL1Q8TD10 442 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF296Q8WUU4 475 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 MED15Q96RN5 788 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 TEX13BQ9BXU2 312 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 SPATC1LQ9H0A9 340 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 PLCB1Q9NQ66 1216 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 SLC12A4Q9UP95 1085 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 A0A1W2PQC6 194 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 E7ENQ6 273 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CNMDO75829 334 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 WFS1O76024 890 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 SMARCA1P28370 1054 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 FOSBP53539 338 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 LACTBP83111 547 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CDK17Q00537 523 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 TMEM132BQ14DG7 1078 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 MEA1Q16626 185 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 PTPN21Q16825 1174 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 APBB1IPQ7Z5R6 666 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 ADGRF4Q8IZF3 695 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 SPATA4Q8NEY3 305 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CPLX3Q8WVH0 158 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 GDAP1L1Q96MZ0 367 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 CNOT10Q9H9A5 744 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 BAIAP2L1Q9UHR4 511 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 NID2Q14112 1375 aa12.5□□□□□ -0.41
TRAPPC3-205ENST00000462715 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 SLC25A27O95847 323 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 ABL1P00519 1130 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 KRT9P35527 623 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 STAT3P40763 770 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 SEC24CP53992 1094 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 MAATS1Q7Z4T9 603 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 ANKS4BQ8N8V4 417 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 LRRC1Q9BTT6 524 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 HDAC6Q9UBN7 1215 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZNF214Q9UL59 606 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 KIF28PB7ZC32 967 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 ZMYND10O75800 440 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 MARCKSP29966 332 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 MAPK4P31152 587 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 LBX1P52954 281 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 FCGRTP55899 365 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 HIBCHQ6NVY1 386 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 SHCBP1Q8NEM2 672 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 KCNMB3Q9NPA1 279 aa12.49□□□□□ -0.41
TRAPPC3-205ENST00000462715 ASAP2O43150 1006 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 ICAM1P05362 532 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 ATP4AP20648 1035 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 C2orf54Q08AI8 447 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 CUL3Q13618 768 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 BYSLQ13895 437 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 THEMIS2Q5TEJ8 643 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 HAUS3Q68CZ6 603 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCDC174Q6PII3 467 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 RIOX2Q8IUF8 465 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 SH2D3CQ8N5H7 860 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 B4GALNT2Q8NHY0 566 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 CCDC43Q96MW1 224 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 GSDMAQ96QA5 445 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 MROH8Q9H579 483 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
TRAPPC3-205ENST00000462715 JMJD4Q9H9V9 463 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms