RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 DDX11Q96FC9 970 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 ABHD17AQ96GS6 310 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 DMRTB1Q96MA1 342 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 APOL5Q9BWW9 433 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 TBC1D17Q9HA65 648 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 AVENQ9NQS1 362 aaPredicted RBP6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 FBXO28Q9NVF7 368 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 RWDD3Q9Y3V2 267 aa6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 URB1O60287 2271 aaKnown RBP6.44□□□□□ -1.38
SBDSP1-204ENST00000453858 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 EIF4E1BA6NMX2 242 aaKnown RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 J3QKU1 62 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 GIPC1O14908 333 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 NARSO43776 548 aaKnown RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 LRRN2O75325 713 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 PDGFAP04085 211 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 HOXB8P17481 243 aaPredicted RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 COPB2P35606 906 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 CCR10P46092 362 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 MAP2K3P46734 347 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 PLCD1P51178 756 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 CNTN2Q02246 1040 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 DNM1Q05193 864 aaKnown RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 KCNMA1Q12791 1236 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 CCINQ13939 588 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 SEPT2Q15019 361 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 ABCB5Q2M3G0 1257 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 RABL6Q3YEC7 729 aaPredicted RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 DUSP28Q4G0W2 176 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 FAM47CQ5HY64 1035 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 FAM26DQ5JW98 314 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 BEND3Q5T5X7 828 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 IL31Q6EBC2 164 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 ZNF605Q86T29 641 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 RGL4Q8IZJ4 473 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 CMTR1Q8N1G2 835 aaKnown RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 TSPYL6Q8N831 410 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 POF1BQ8WVV4 589 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 DNAAF4Q8WXU2 420 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 NECTIN4Q96NY8 510 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 CDCA3Q99618 268 aaPredicted RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 KCNK12Q9HB15 430 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 KCNK4Q9NYG8 393 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 ABCF2Q9UG63 623 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 GMEB2Q9UKD1 530 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 FLT1P17948 1338 aa6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 PDS5AQ29RF7 1337 aaKnown RBP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 NIPBLQ6KC79 2804 aaeCLIP6.43□□□□□ -1.38
SBDSP1-204ENST00000453858 DOPEY2Q9Y3R5 2298 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 CACNA1EQ15878 2313 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 GRM8O00222 908 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 WDR46O15213 610 aaKnown RBP6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 TDGF1P13385 188 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 MX2P20592 715 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 MAPK1P28482 360 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 SHMT1P34896 483 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 TECP42680 631 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 CSTF1Q05048 431 aaKnown RBP6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 TROAPQ12815 778 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 SFSWAPQ12872 951 aaKnown RBP6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 RASGRF1Q13972 1273 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 CERKLQ49MI3 558 aaPredicted RBP6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 LAIR1Q6GTX8 287 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 PSAPL1Q6NUJ1 521 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 ATG9AQ7Z3C6 839 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 MAPKAPK5Q8IW41 473 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 ZNF843Q8N446 348 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 KLHL23Q8NBE8 558 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 KLHDC4Q8TBB5 520 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 RUNDC1Q96C34 613 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 IFIH1Q9BYX4 1025 aaKnown RBP6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 CYP26B1Q9NR63 512 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 GNL3LQ9NVN8 582 aaKnown RBP6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 FBXL21Q9UKT6 434 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 POLIQ9UNA4 740 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 IL16Q14005 1332 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 PDZD2O15018 2839 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 COL6A6A6NMZ7 2263 aa6.42□□□□□ -1.38
SBDSP1-204ENST00000453858 FAM221BA6H8Z2 402 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ATP2A1O14983 1001 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 XYLBO75191 536 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 EOMESO95936 686 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 LDHCP07864 332 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 MYL3P08590 195 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 BMP4P12644 408 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ERVFC1P60507 584 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 SPTY2D1Q68D10 685 aaPredicted RBP6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 SPICE1Q8N0Z3 855 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ANKRD44Q8N8A2 993 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ZNF513Q8N8E2 541 aaPredicted RBP6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 PJA1Q8NG27 643 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 FEZF2Q8TBJ5 459 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 TGFBRAP1Q8WUH2 860 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 PMEPA1Q969W9 287 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 SUCLG2Q96I99 432 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 ASB16Q96NS5 453 aa6.41□□□□□ -1.38
SBDSP1-204ENST00000453858 PNMA5Q96PV4 448 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms