RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MAATS1Q7Z4T9 603 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 UBE3DQ7Z6J8 389 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SESTD1Q86VW0 696 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 FAM114A1Q8IWE2 563 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCAR1Q8IX12 1150 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 RPAP2Q8IXW5 612 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SLC15A3Q8IY34 581 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC146Q8IYE0 955 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATP11CQ8NB49 1132 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 KCT2Q8NC54 265 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 GSTCDQ8NEC7 633 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRPC4APQ8TEL6 797 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPP1R13LQ8WUF5 828 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPP1R14AQ96A00 147 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 TP53INP1Q96A56 240 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 AZIN2Q96A70 460 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 VWCEQ96DN2 955 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 DHTKD1Q96HY7 919 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 RCC1LQ96I51 464 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZNF512BQ96KM6 892 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPP1R13BQ96KQ4 1090 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC114Q96M63 670 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MPHOSPH8Q99549 860 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MAK16Q9BXY0 300 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMPRSS13Q9BYE2 586 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ASPSCR1Q9BZE9 553 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 MTFR1LQ9H019 292 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 GBP3Q9H0R5 595 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATXN3LQ9H3M9 355 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 GOLPH3LQ9H4A5 285 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 NRDE2Q9H7Z3 1164 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ACTR5Q9H9F9 607 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SLC52A2Q9HAB3 445 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZFP64Q9NPA5 681 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 LUC7LQ9NQ29 371 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 PAPOLBQ9NRJ5 636 aaKnown RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 WHRNQ9P202 907 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 IMPACTQ9P2X3 320 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 SFMBT1Q9UHJ3 866 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 USP21Q9UK80 565 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CROTQ9UKG9 612 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 EMC9Q9Y3B6 208 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 USP32Q8NFA0 1604 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 KDM6AO15550 1401 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 CRYBG1Q9Y4K1 1723 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 TMEM94Q12767 1356 aa4.01□□□□□ -1.77
HMGB3P8-201ENST00000449709 ASXL1Q8IXJ9 1541 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ATP7BP35670 1465 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 BICDL2A1A5D9 508 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 GOLGA6L9A6NEM1 432 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 GOLGA6L10A6NI86 522 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 EIF3FO00303 357 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 EIF3HO15372 352 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 BIRC5O15392 142 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 P4HA2O15460 535 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 DLX3O60479 287 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 CLASP2O75122 1294 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 PPM1BO75688 479 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 MBD4O95243 580 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 RASGRP1O95267 797 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SYF2O95926 243 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ASLP04424 464 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 GNAI3P08754 354 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC175P0C221 793 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 H2AFB1P0C5Y9 115 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 H2AFB2P0C5Z0 115 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC192P0DO97 292 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 RPL17P18621 184 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SMARCA1P28370 1054 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 TCF7P36402 384 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 RANBP1P43487 201 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 PSMD7P51665 324 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 RARSP54136 660 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 OXCT1P55809 520 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 EVCP57679 992 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 GABREP78334 506 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 NRG1Q02297 640 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ADCY1Q08828 1119 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SNW1Q13573 536 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 TTLL4Q14679 1199 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 DHCR24Q15392 516 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 SNCBQ16143 134 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 CCDC40Q4G0X9 1142 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 NBPF12Q5TAG4 269 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR93Q6P2C0 686 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 C3orf62Q6ZUJ4 267 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 LHFPL2Q6ZUX7 228 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 B4GALNT4Q76KP1 1039 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 NECAB2Q7Z6G3 386 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 FGD2Q7Z6J4 655 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ADAT2Q7Z6V5 191 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 LCA5Q86VQ0 697 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 TRIM59Q8IWR1 403 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 C7orf61Q8IZ16 206 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 FUKQ8N0W3 1084 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ARHGEF39Q8N4T4 335 aa4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZGPATQ8N5A5 531 aaKnown RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 ZBTB8BQ8NAP8 495 aaPredicted RBP4□□□□□ -1.77
HMGB3P8-201ENST00000449709 WDR66Q8TBY9 1149 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms