RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 FAM47EQ6ZV65 393 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 MAB21L3Q8N8X9 362 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 ALG3Q92685 438 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 DDX23Q9BUQ8 820 aaKnown RBP17.99■□□□□ 0.47
PKP4-204ENST00000421462 LRRC27Q9C0I9 530 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 ZDHHC18Q9NUE0 388 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 USP15Q9Y4E8 981 aaPredicted RBP17.99■□□□□ 0.47
PKP4-204ENST00000421462 CFAP73A6NFT4 308 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 CES2O00748 559 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 AKAP3O75969 853 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 SLC16A2P36021 539 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 PDE6CP51160 858 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 KLRC3Q07444 240 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 GNPTABQ3T906 1256 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 DUPD1Q68J44 220 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 POP1Q99575 1024 aaKnown RBP17.99■□□□□ 0.47
PKP4-204ENST00000421462 MSH2P43246 934 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 PTENP60484 403 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 IRX1P78414 480 aaPredicted RBP17.98■□□□□ 0.47
PKP4-204ENST00000421462 ANKRD20A2Q5SQ80 823 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 ANKRD20A1Q5TYW2 823 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 ANKRD20A3Q5VUR7 823 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 CCDC105Q8IYK2 499 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 LNX1Q8TBB1 728 aaPredicted RBP17.98■□□□□ 0.47
PKP4-204ENST00000421462 HES6Q96HZ4 224 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 KCTD10Q9H3F6 313 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 TMEM120BA0PK00 339 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 EDIL3O43854 480 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 AP1G2O75843 785 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 GSTA1P08263 222 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 CALRP27797 417 aaKnown RBP17.98■□□□□ 0.47
PKP4-204ENST00000421462 LACTBP83111 547 aaPredicted RBP17.98■□□□□ 0.47
PKP4-204ENST00000421462 ATP11AP98196 1134 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 CNGA2Q16280 664 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 C10orf76Q5T2E6 689 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 C6orf118Q5T5N4 469 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 PALB2Q86YC2 1186 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 RASGEF1CQ8N431 466 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 CENPTQ96BT3 561 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 THAP2Q9H0W7 228 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 RPTORQ8N122 1335 aa17.98■□□□□ 0.47
PKP4-204ENST00000421462 SUN1O94901 812 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 ZBTB48P10074 688 aaPredicted RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 STAT1P42224 750 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 VPS41P49754 854 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 COPS2P61201 443 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 POU5F1Q01860 360 aaKnown RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 ZNF268Q14587 947 aaPredicted RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 ZDHHC24Q6UX98 284 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 CRELD2Q6UXH1 353 aaPredicted RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 SFR1Q86XK3 245 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 FITM2Q8N6M3 262 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 KRT35Q92764 455 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 ARHGEF2Q92974 986 aaKnown RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 ETNK1Q9HBU6 452 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 BZW2Q9Y6E2 419 aaKnown RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 ANKRD63C9JTQ0 380 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 KIAA0391O15091 583 aaKnown RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 ATP2A2P16615 1042 aaKnown RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 PSMC6P62333 389 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 CYP4A11Q02928 519 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 TRIP13Q15645 432 aaPredicted RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 EXOC3L1Q86VI1 746 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 RDH13Q8NBN7 331 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 RNF217Q8TC41 542 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 HAS1Q92839 578 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 SPZ1Q9BXG8 430 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 MTRF1LQ9UGC7 380 aaKnown RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 RSPH10B2B2RC85 870 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 RSPH10BP0C881 870 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 TMEM119Q4V9L6 283 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 ZNF746Q6NUN9 644 aaPredicted RBP17.97■□□□□ 0.47
PKP4-204ENST00000421462 PGM2Q96G03 612 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 RMDN2Q96LZ7 410 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 RASAL2Q9UJF2 1139 aa17.97■□□□□ 0.47
PKP4-204ENST00000421462 A0A1B0GUL6 1792 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 CAMTA2O94983 1202 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 LDHBP07195 334 aaKnown RBP17.96■□□□□ 0.47
PKP4-204ENST00000421462 CYP11B2P19099 503 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 RFC4P35249 363 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 MAPK7Q13164 816 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 SNX1Q13596 522 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 AUHQ13825 339 aaKnown RBP17.96■□□□□ 0.47
PKP4-204ENST00000421462 OSBPL1AQ9BXW6 950 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 CTTNBP2NLQ9P2B4 639 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 TCRBV7S2A1N4TA0A589 114 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 GCNT3O95395 438 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 CDK8P49336 464 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 ADCY2Q08462 1091 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 GRIK3Q13003 919 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 MIS18BP1Q6P0N0 1132 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 FBXO33Q7Z6M2 555 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 CCHCR1Q8TD31 782 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 TMEM237Q96Q45 408 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 BATF3Q9NR55 127 aa17.96■□□□□ 0.47
PKP4-204ENST00000421462 BSDC1Q9NW68 430 aaPredicted RBP17.96■□□□□ 0.47
PKP4-204ENST00000421462 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms