RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 PCDHGA2Q9Y5H1 932 aa6.14□□□□□ -1.43
HMGB3P7-201ENST00000400214 MYH2Q9UKX2 1941 aa6.14□□□□□ -1.43
HMGB3P7-201ENST00000400214 MYO5AQ9Y4I1 1855 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 FAM170AA1A519 330 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PABPN1LA6NDY0 278 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 RRN3P2A6NIE6 340 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 SNAP23O00161 211 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 SASH1O94885 1247 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZBED1O96006 694 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 BMP6P22004 513 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ITPKAP23677 461 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 KRT20P35900 424 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 IL15P40933 162 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 GRIA2P42262 883 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 KCNJ4P48050 445 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZNF157P51786 506 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 IL2P60568 153 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 FKBP1AP62942 108 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ATP8B2P98198 1209 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 SLC7A5Q01650 507 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PFKPQ01813 784 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PPFIA1Q13136 1202 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 CLN3Q13286 438 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 MVPQ14764 893 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 LRRFIP1Q32MZ4 808 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 GNPTABQ3T906 1256 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 RRP12Q5JTH9 1297 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PPP1R26Q5T8A7 1209 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PIK3R6Q5UE93 754 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PGM2L1Q6PCE3 622 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 NSMFQ6X4W1 530 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 SYDE1Q6ZW31 735 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZNF804AQ7Z570 1209 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 BTLAQ7Z6A9 289 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ITPRIPQ8IWB1 547 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZNF713Q8N859 430 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 LSMEM1Q8N8F7 131 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 KCT2Q8NC54 265 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 FAM156AQ8NDB6 213 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 TDRD7Q8NHU6 1098 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 KLHDC4Q8TBB5 520 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 SSH3Q8TE77 659 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 GAL3ST3Q96A11 431 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 CCDC47Q96A33 483 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 AHCYL2Q96HN2 611 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 FAM84BQ96KN1 310 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZKSCAN3Q9BRR0 538 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 APOL5Q9BWW9 433 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 LGR4Q9BXB1 951 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 GSX2Q9BZM3 304 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 CXorf56Q9H5V9 222 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 AGO4Q9HCK5 861 aaKnown RBP6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 CD209Q9NNX6 404 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 DDX19BQ9UMR2 479 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 LRCH1Q9Y2L9 728 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 FAM205AQ6ZU69 1335 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 MYO3BQ8WXR4 1341 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PASKQ96RG2 1323 aa6.13□□□□□ -1.43
HMGB3P7-201ENST00000400214 PNMA6EA0A0J9YXQ4 647 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 SYNDIG1LA6NDD5 238 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 H7C1D1 291 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 SRGAP3O43295 1099 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 TIPRLO75663 272 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 TRPA1O75762 1119 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 BAIAP3O94812 1187 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 FKBP9O95302 570 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 FGFR1P11362 822 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 VCAM1P19320 739 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 FLT3P36888 993 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 GRM5P41594 1212 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 RPL6Q02878 288 aaKnown RBP6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 PTPN11Q06124 597 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 KIF22Q14807 665 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 METTL24Q5JXM2 366 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 OVOS1Q6IE37 1185 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 SWSAP1Q6NVH7 229 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 CYP26C1Q6V0L0 522 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 UBE2R2Q712K3 238 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 FKBP9P1Q75LS8 142 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 SRGAP1Q7Z6B7 1085 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 LMNTD2Q8IXW0 634 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 TMEM151AQ8N4L1 468 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZBTB34Q8NCN2 500 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 PANK1Q8TE04 598 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 LPIN2Q92539 896 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 DDX11Q96FC9 970 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 SEC62Q99442 399 aaKnown RBP6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 SLC26A6Q9BXS9 759 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 CHMP4BQ9H444 224 aaKnown RBP6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 ZBTB40Q9NUA8 1239 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 ARHGAP28Q9P2N2 729 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 CDC23Q9UJX2 597 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 POLHQ9Y253 713 aa6.12□□□□□ -1.43
HMGB3P7-201ENST00000400214 RASA4BC9J798 803 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 RASA4O43374 803 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 XPOTO43592 962 aaKnown RBP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 PLOD3O60568 738 aa6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 HNRNPCP07910 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB3P7-201ENST00000400214 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms