RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PPP1R2P41236 205 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
NFKB1-202ENST00000394820 CEP72Q9P209 647 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 CAND2O75155 1236 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 ADRA2BP18089 450 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 SLC18A3Q16572 532 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 LONRF1Q17RB8 773 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 ODR4Q5SWX8 454 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 SEPT14Q6ZU15 432 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 DAGLBQ8NCG7 672 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 C1orf54Q8WWF1 131 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 CSRNP1Q96S65 589 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 UBE2TQ9NPD8 197 aaPredicted RBP14.3□□□□□ -0.12
NFKB1-202ENST00000394820 H0YIN7 160 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 M0R2N6 131 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 MTMR3Q13615 1198 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 ABCB5Q2M3G0 1257 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 NLGN1Q8N2Q7 840 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
NFKB1-202ENST00000394820 PRPF38AQ8NAV1 312 aaKnown RBP14.3□□□□□ -0.12
NFKB1-202ENST00000394820 HAUS1Q96CS2 278 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 BTBD6Q96KE9 485 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 ANO3Q9BYT9 981 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 RAB17Q9H0T7 212 aa14.3□□□□□ -0.12
NFKB1-202ENST00000394820 PPIP5K2O43314 1243 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 MYBP10242 640 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 PRPHP41219 470 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 GALCP54803 685 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 LRRC63Q05C16 580 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 QPCTQ16769 361 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 EPC2Q52LR7 807 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 MIIPQ5JXC2 388 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 SRRM1Q8IYB3 904 aaKnown RBP14.29□□□□□ -0.12
NFKB1-202ENST00000394820 USP38Q8NB14 1042 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 CYP2W1Q8TAV3 490 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 CRAMP1Q96RY5 1269 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 UBXN6Q9BZV1 441 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 MTUS1Q9ULD2 1270 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 F5H6K3 240 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 RASGRF2O14827 1237 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 C21orf2O43822 256 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 CALUO43852 315 aaPredicted RBP14.29□□□□□ -0.12
NFKB1-202ENST00000394820 KLRC3Q07444 240 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 SMAD1Q15797 465 aaKnown RBP14.29□□□□□ -0.12
NFKB1-202ENST00000394820 C7orf25Q9BPX7 421 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 ALG13Q9NP73 1137 aaKnown RBP14.29□□□□□ -0.12
NFKB1-202ENST00000394820 DNAJC12Q9UKB3 198 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 TTC7AQ9ULT0 858 aaPredicted RBP14.29□□□□□ -0.12
NFKB1-202ENST00000394820 LRP5O75197 1615 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 THAP12O43422 761 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 ECE2O60344 883 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 DIAPH2O60879 1101 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 UCHL3P15374 230 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 NPR1P16066 1061 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 SLC29A2Q14542 456 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 CRY2Q49AN0 593 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 SYCP2LQ5T4T6 812 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 APOBEC3HQ6NTF7 200 aaKnown RBP14.29□□□□□ -0.12
NFKB1-202ENST00000394820 ERGIC2Q96RQ1 377 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
NFKB1-202ENST00000394820 GCLMP48507 274 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.12
NFKB1-202ENST00000394820 KCNA1Q09470 495 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 GPATCH4Q5T3I0 446 aaKnown RBP14.28□□□□□ -0.12
NFKB1-202ENST00000394820 CYB5D1Q6P9G0 228 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 ZNF365Q70YC5 407 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 FBXO11Q86XK2 927 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 SLC17A8Q8NDX2 589 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 VPS37BQ9H9H4 285 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 RIC8AQ9NPQ8 531 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 GRID2IPA4D2P6 1211 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 MXRA7P84157 204 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 UBL4BQ8N7F7 174 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 BCAS3Q9H6U6 928 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 DDX20Q9UHI6 824 aaKnown RBP14.28□□□□□ -0.12
NFKB1-202ENST00000394820 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
NFKB1-202ENST00000394820 SPAG7O75391 227 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 FAM107AO95990 144 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 ATP11AP98196 1134 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 DRAP1Q14919 205 aaPredicted RBP14.28□□□□□ -0.12
NFKB1-202ENST00000394820 SPDL1Q96EA4 605 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 NUCKS1Q9H1E3 243 aaKnown RBP14.28□□□□□ -0.12
NFKB1-202ENST00000394820 FGFR1OP2Q9NVK5 253 aa14.28□□□□□ -0.12
NFKB1-202ENST00000394820 A6NNZ2 444 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 ATF7P17544 494 aaPredicted RBP14.27□□□□□ -0.12
NFKB1-202ENST00000394820 PAX7P23759 505 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 ELF1P32519 619 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 PSMC6P62333 389 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 IFI35P80217 286 aaPredicted RBP14.27□□□□□ -0.12
NFKB1-202ENST00000394820 BIRC3Q13489 604 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 TUBB8Q3ZCM7 444 aa14.27□□□□□ -0.12
NFKB1-202ENST00000394820 ZNF571Q7Z3V5 609 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms