RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RASGRF2O14827 1237 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 BAG3O95817 575 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 LRRC41Q15345 812 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 CGB2Q6NT52 195 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 ZNF571Q7Z3V5 609 aaPredicted RBP22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 ECHDC2Q86YB7 292 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 TMEM237Q96Q45 408 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 DOT1LQ8TEK3 1739 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 CYP2D7A0A087X1C5 515 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 FGFR4P22455 802 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 AMPD3Q01432 767 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 PARP6Q2NL67 630 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 DYMQ7RTS9 669 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 TTC8Q8TAM2 541 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 MAIP1Q8WWC4 291 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 OCEL1Q9H607 264 aa22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 CNOT7Q9UIV1 285 aaKnown RBP22.23■■□□□ 1.15
TMEFF1-201ENST00000374879 AFPP02771 609 aaKnown RBP22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 GYG1P46976 350 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 GDAP1Q8TB36 358 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 KLHL14Q9P2G3 628 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 SUCLA2Q9P2R7 463 aaPredicted RBP22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 TMEM120BA0PK00 339 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 FAM163BP0C2L3 166 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 CALML3P27482 149 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 LRRC63Q05C16 580 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 MUM1Q2TAK8 710 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 BARGINQ6ZT62 677 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 NT5DC3Q86UY8 548 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 GUF1Q8N442 669 aaKnown RBP22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 ZNF513Q8N8E2 541 aaPredicted RBP22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 ENDOVQ8N8Q3 282 aaKnown RBP22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 ANKRD42Q8N9B4 389 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 PCDHA4Q9UN74 947 aa22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 RTCBQ9Y3I0 505 aaKnown RBP22.22■■□□□ 1.15
TMEFF1-201ENST00000374879 DDAH1O94760 285 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 PTENP60484 403 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 DYNC1I2Q13409 638 aaKnown RBP22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 IRGCQ6NXR0 463 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 SLFN11Q7Z7L1 901 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 NCAPG2Q86XI2 1143 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 CRAMP1Q96RY5 1269 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 ERVK-5Q9HDB9 667 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 COL14A1Q05707 1796 aaKnown RBP22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 MYMKA6NI61 221 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 WTIPA6NIX2 430 aaPredicted RBP22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 NMT2O60551 498 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 RBBP8NLQ8NC74 664 aaPredicted RBP22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 TRAPPC9Q96Q05 1148 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 STMN4Q9H169 189 aaPredicted RBP22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 ANAPC4Q9UJX5 808 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 NAGPAQ9UK23 515 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
TMEFF1-201ENST00000374879 LOC102724428A0A0B4J2F2 783 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 KIAA0391O15091 583 aaKnown RBP22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 SIK1P57059 783 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 PRPF4BQ13523 1007 aaKnown RBP22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 KIAA1755Q5JYT7 1200 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 RNF43Q68DV7 783 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 PPP1R12CQ9BZL4 782 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 TXLNGQ9NUQ3 528 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 SCOCQ9UIL1 159 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 FOXO6A8MYZ6 492 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 IMPDH2P12268 514 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 SCNN1BP51168 640 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 ITPK1Q13572 414 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 C10orf76Q5T2E6 689 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 ALKBH5Q6P6C2 394 aaKnown RBP22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 BTNL9Q6UXG8 535 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 HES6Q96HZ4 224 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 TMEM109Q9BVC6 243 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 MYLK2Q9H1R3 596 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 LRMDAQ9H2I8 198 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 HAO1Q9UJM8 370 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 PCDHA6Q9UN73 950 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 PCDHA8Q9Y5H6 950 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 COL4A3BPQ9Y5P4 624 aa22.2■■□□□ 1.14
TMEFF1-201ENST00000374879 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 ENTPD5O75356 428 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 GH1P01241 217 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 TARSP26639 723 aaKnown RBP22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 VSTM1Q6UX27 236 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 IRF2BP2Q7Z5L9 587 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 CKAP2Q8WWK9 683 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 ZNF333Q96JL9 665 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 RIOK1Q9BRS2 568 aaKnown RBP22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 ZSCAN9O15535 394 aaPredicted RBP22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 RASA1P20936 1047 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 JAMLQ86YT9 394 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 NMRK1Q9NWW6 199 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 COL4A1P02462 1669 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 ZNF804BA4D1E1 1349 aa22.19■■□□□ 1.14
TMEFF1-201ENST00000374879 M0R2N6 131 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 RIPK2O43353 540 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 TECP42680 631 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 DYNLL1P63167 89 aaKnown RBP22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 UNC13DQ70J99 1090 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 SDCCAG8Q86SQ7 713 aaPredicted RBP22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 CROCCP2Q86T23 111 aa22.18■■□□□ 1.14
TMEFF1-201ENST00000374879 ARHGEF2Q92974 986 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms