RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 ADAM11O75078 769 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 RFPL1O75677 317 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CPEP16870 476 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 ARNTP27540 789 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 ALDH1B1P30837 517 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 KIF5BP33176 963 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 PIP4K2AP48426 406 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 IRAK1P51617 712 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 NEK3P51956 506 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 KRT83P78385 493 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 PWP1Q13610 501 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 SLC9A5Q14940 896 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 KRT40Q6A162 431 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CXorf57Q6NSI4 855 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 LVRNQ6Q4G3 990 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 AFAP1L1Q8TED9 768 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 DPF2Q92785 391 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CENPTQ96BT3 561 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 LENG1Q96BZ8 264 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 TIFAQ96CG3 184 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 HNRNPABQ99729 332 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM167BQ9BTA0 163 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 RUSC1Q9BVN2 902 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 KCNH6Q9H252 994 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 PAK6Q9NQU5 681 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 OBP2AQ9NY56 170 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 KCNK4Q9NYG8 393 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 GTF2IRD1Q9UHL9 959 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 XPO7Q9UIA9 1087 aaKnown RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CEP131Q9UPN4 1083 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 DGKBQ9Y6T7 804 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 MORC2Q9Y6X9 1032 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CHD9Q3L8U1 2897 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CEP250Q9BV73 2442 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 ITIH6Q6UXX5 1313 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 CENPJQ9HC77 1338 aaPredicted RBP4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 WDR87Q6ZQQ6 2873 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 DNAH12Q6ZR08 3092 aa4.04□□□□□ -1.76
ECHDC1-205ENST00000368295 LOC100289279A0A1B0GTE1 492 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ERVV-2B6SEH9 535 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 PES1O00541 588 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 CPLX1O14810 134 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 DDX3YO15523 660 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 PDPK1O15530 556 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 GSTP1P09211 210 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 TNFAIP3P21580 790 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 MAOBP27338 520 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 LIG3P49916 1009 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 EPHB4P54760 987 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 INHBEP58166 350 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ZNF280AP59817 542 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 RPS26P62854 115 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 APOBRQ0VD83 1088 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 IFT88Q13099 833 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 TNNI3KQ59H18 835 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 PCNX4Q63HM2 1172 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 SCARA3Q6AZY7 606 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 OTUD7BQ6GQQ9 843 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 TTBK2Q6IQ55 1244 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 RSRC2Q7L4I2 434 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ARMC9Q7Z3E5 817 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 SNX32Q86XE0 403 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 JPH3Q8WXH2 748 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ATOH1Q92858 354 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 TBC1D31Q96DN5 1066 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 FAM210AQ96ND0 272 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 NRSN2Q9GZP1 204 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 KRT82Q9NSB4 513 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 SEL1LQ9UBV2 794 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 A0A1W2PP64 1363 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 NCAPD2Q15021 1401 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 SCN7AQ01118 1682 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 VPS13AQ96RL7 3174 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 PRR23AA6NEV1 266 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 C19orf81C9J6K1 198 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 F8W735 103 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ADCY3O60266 1144 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 WISP1O95388 367 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ASMTLO95671 621 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 BAG2O95816 211 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 MYCLP1P12525 358 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 SELPP16109 830 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 RXRGP48443 463 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 CASP7P55210 303 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 SNX16P57768 344 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ROR1Q01973 937 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 CALD1Q05682 793 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 CHAF1AQ13111 956 aaPredicted RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 PRKG2Q13237 762 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 GRIK4Q16099 956 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 KIAA1614Q5VZ46 1190 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 DUSP27Q5VZP5 1158 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 DIEXFQ68CQ4 756 aaKnown RBP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 LLGL2Q6P1M3 1020 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ERC1Q8IUD2 1116 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 ZFPM2Q8WW38 1151 aa4.03□□□□□ -1.76
ECHDC1-205ENST00000368295 BADQ92934 168 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms