RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CLEC2LP0C7M8 214 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 MC4RP32245 332 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 STAT5AP42229 794 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 RECQLP46063 649 aaPredicted RBP7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 TBX4P57082 545 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 TMEM62Q0P6H9 643 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 MOGSQ13724 837 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 ODF1Q14990 250 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 CLUL1Q15846 466 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 TMEM240Q5SV17 173 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 FAM102BQ5T8I3 360 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRAMEF18Q5VWM3 479 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 CD276Q5ZPR3 534 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 ESPNLQ6ZVH7 1005 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 C14orf80Q86SX3 495 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 THEMISQ8N1K5 641 aaPredicted RBP7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 CPA6Q8N4T0 437 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 ALG3Q92685 438 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 ORAI2Q96SN7 254 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 ANO3Q9BYT9 981 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 TCF7L1Q9HCS4 588 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 GEMIN8Q9NWZ8 242 aaKnown RBP7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 PLA2G2DQ9UNK4 145 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 MRFAP1Q9Y605 127 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 DNMT1P26358 1616 aaKnown RBP7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 MYO3AQ8NEV4 1616 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 PZPP20742 1482 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 CT47B1P0C2W7 299 aaPredicted RBP7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 ATF3P18847 181 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 ENPP1P22413 925 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 MANFP55145 182 aaKnown RBP7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 YBX1P67809 324 aaKnown RBP7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 FSCN1Q16658 493 aaKnown RBP7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 CT83Q5H943 113 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 TTC38Q5R3I4 469 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 NXNQ6DKJ4 435 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 ETV3LQ6ZN32 361 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 ATG4DQ86TL0 474 aaPredicted RBP7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 AMIGO3Q86WK7 504 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 TCEAL8Q8IYN2 117 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 RELTQ969Z4 430 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 E2F7Q96AV8 911 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 TUBGCP5Q96RT8 1024 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 HSPBP1Q9NZL4 362 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 ARHGAP28Q9P2N2 729 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 GABBR1Q9UBS5 961 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 KCNG1Q9UIX4 513 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 PPP2R3BQ9Y5P8 575 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 VWDEQ8N2E2 1590 aa7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 CLTCQ00610 1675 aaKnown RBP7.32□□□□□ -1.24
RNU4-39P-201ENST00000362455 MED14O60244 1454 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 KLHL33A6NCF5 533 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 ELL2O00472 640 aaPredicted RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 ABLIM1O14639 778 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRPF3O43395 683 aaKnown RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRC1O43663 620 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 NPHP4O75161 1426 aaPredicted RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRLP01236 227 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 THBS2P35442 1172 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 SRSF2Q01130 221 aaKnown RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 MLC1Q15049 377 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 ACAP2Q15057 778 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 MED1Q15648 1581 aaPredicted RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 ZBTB41Q5SVQ8 909 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 CEP162Q5TB80 1403 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 TIGD7Q6NT04 549 aaPredicted RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 TTLL7Q6ZT98 887 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 SUPT6HQ7KZ85 1726 aaKnown RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 TMC6Q7Z403 805 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 IRF2BP1Q8IU81 584 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 Q8N3U1 123 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 MAML3Q96JK9 1138 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 MYL10Q9BUA6 226 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 QRSL1Q9H0R6 528 aaKnown RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 SLC39A2Q9NP94 309 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 UCKL1Q9NWZ5 548 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 DNAJC28Q9NX36 388 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 RBPJLQ9UBG7 517 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 ANKRD6Q9Y2G4 727 aa7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 OAS3Q9Y6K5 1087 aaKnown RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 ZNF142P52746 1687 aaPredicted RBP7.31□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRPF6O94906 941 aaKnown RBP7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 APOL3O95236 402 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 MPIG6BO95866 241 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 GLI1P08151 1106 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 PF4V1P10720 104 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 PTGS1P23219 599 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 ZNF200P98182 395 aaPredicted RBP7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 SLC6A3Q01959 620 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 ALDH6A1Q02252 535 aaKnown RBP7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 MYBPC3Q14896 1274 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 UGT8Q16880 541 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 CR1LQ2VPA4 569 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRAMEF9Q5VWM5 478 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 CCDC62Q6P9F0 684 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 CBLL1Q75N03 491 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 PROSER1Q86XN7 944 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 TPH2Q8IWU9 490 aa7.3□□□□□ -1.24
RNU4-39P-201ENST00000362455 CMTR2Q8IYT2 770 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms