RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 GRAMD1BQ3KR37 738 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 JAMLQ86YT9 394 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 TMEM47Q9BQJ4 181 aa17.15■□□□□ 0.34
CLSTN1-201ENST00000361311 AMPD2Q01433 879 aa17.14■□□□□ 0.34
CLSTN1-201ENST00000361311 CAV1Q03135 178 aa17.14■□□□□ 0.34
CLSTN1-201ENST00000361311 RCSD1Q6JBY9 416 aa17.14■□□□□ 0.34
CLSTN1-201ENST00000361311 MTMR8Q96EF0 704 aa17.14■□□□□ 0.34
CLSTN1-201ENST00000361311 TTC1Q99614 292 aa17.14■□□□□ 0.34
CLSTN1-201ENST00000361311 SPAG7O75391 227 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 PDXDC2PQ6P474 469 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 TRIM59Q8IWR1 403 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 NME8Q8N427 588 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 PPARGC1AQ9UBK2 798 aaKnown RBP17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 L3MBTL1Q9Y468 752 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 MYMKA6NI61 221 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 ZWINTO95229 277 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 ACTN1P12814 892 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 TRPC3Q13507 836 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 KNOP1Q1ED39 458 aaKnown RBP17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 NAALADL2Q58DX5 795 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 TEKT4Q8WW24 435 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 PTPRUQ92729 1446 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 GHRP10912 638 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 UCHL3P15374 230 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 SLC16A2P36021 539 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 MXI1P50539 228 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 TLR10Q9BXR5 811 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 PABPC3Q9H361 631 aaKnown RBP17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
CLSTN1-201ENST00000361311 SFI1A8K8P3 1242 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 NVLO15381 856 aaKnown RBP17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 CAND2O75155 1236 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 FTLP02792 175 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 CENPUQ71F23 418 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 DTX3LQ8TDB6 740 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 GRM4Q14833 912 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 POTEB3A0JP26 581 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 POTECB2RU33 542 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 FOSP01100 380 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 AOC3Q16853 763 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 TTBK2Q6IQ55 1244 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 POTEBQ6S5H4 581 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 PYROXD1Q8WU10 500 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 USP21Q9UK80 565 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 A0A087X0B3 334 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 UBOX5O94941 541 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 TDP2O95551 362 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 PDCD2Q16342 344 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 BBS9Q3SYG4 887 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 KLHDC7AQ5VTJ3 777 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 BARGINQ6ZT62 677 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 FBXO11Q86XK2 927 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 TRIM11Q96F44 468 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 SUDS3Q9H7L9 328 aaPredicted RBP17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
CLSTN1-201ENST00000361311 TRPA1O75762 1119 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 PMS1P54277 932 aaKnown RBP17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 MIER3Q7Z3K6 550 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 HIPK4Q8NE63 616 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 SLC35G2Q8TBE7 412 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 ARFIP2P53365 341 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 ORC2Q13416 577 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 TRMT10CQ7L0Y3 403 aaKnown RBP17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 C1orf54Q8WWF1 131 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 SYN2Q92777 582 aaPredicted RBP17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 GLG1Q92896 1179 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 ZFATQ9P243 1243 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 C15orf41Q9Y2V0 281 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 CDH16O75309 829 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 KCNA3P22001 575 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 BPIFB4P59827 614 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 ZNF804BA4D1E1 1349 aa17.12■□□□□ 0.33
CLSTN1-201ENST00000361311 PHF2O75151 1096 aa17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 TRIM28Q13263 835 aaKnown RBP17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 C1orf146Q5VVC0 180 aa17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 CEP70Q8NHQ1 597 aa17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 MOV10L1Q9BXT6 1211 aaKnown RBP17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 RFX8Q6ZV50 586 aa17.11■□□□□ 0.33
CLSTN1-201ENST00000361311 NDE1Q9NXR1 346 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms