RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 ZNF713Q8N859 430 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 ENAHQ8N8S7 591 aaPredicted RBP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 MAGOHBQ96A72 148 aaKnown RBP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 MLXIPQ9HAP2 919 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 USP40Q9NVE5 1235 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 TTC26A0AVF1 554 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 GOLGA8AA7E2F4 631 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 H0Y3Z8 333 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 ZBTB43O43298 467 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 KRT16P08779 473 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 BCRP11274 1271 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 NQO1P15559 274 aaKnown RBP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 YY1P25490 414 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 CCNFP41002 786 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 TFAP4Q01664 338 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 KRT31Q15323 416 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 GPR162Q16538 588 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 SGSM1Q2NKQ1 1148 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 CAVIN3Q969G5 261 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 KLHL29Q96CT2 875 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 AGXT2Q9BYV1 514 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 STX8Q9UNK0 236 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 CLRN2A0PK11 232 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 MOCS3O95396 460 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 CTNNA1P35221 906 aaKnown RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 PBX1P40424 430 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 TUFMP49411 452 aaKnown RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 MORC3Q14149 939 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 EMC10Q5UCC4 262 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 UBLCP1Q8WVY7 318 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 CLMNQ96JQ2 1002 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 ECT2Q9H8V3 914 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 PRELID1Q9Y255 219 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SMIM23A6NLE4 172 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 USO1O60763 962 aaKnown RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 UBOX5O94941 541 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 IFNAR2P48551 515 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 ATP11AP98196 1134 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 USP49Q70CQ1 688 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 ZSCAN29Q8IWY8 852 aaPredicted RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 ESR2Q92731 530 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 BHMTQ93088 406 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 CTAGE1Q96RT6 745 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 EYA3Q99504 573 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 MPHOSPH6Q99547 160 aaKnown RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SELENOSQ9BQE4 189 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SLC39A3Q9BRY0 314 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 KRT23Q9C075 422 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 TDRD3Q9H7E2 651 aaKnown RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 KCNMB3Q9NPA1 279 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 LRWD1Q9UFC0 647 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 LUC7L2Q9Y383 392 aaKnown RBP11.13□□□□□ -0.63
SF3B2-201ENST00000322535 FLT1P17948 1338 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 SALL1Q9NSC2 1324 aa11.13□□□□□ -0.63
SF3B2-201ENST00000322535 HIP1RO75146 1068 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 TACC1O75410 805 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ALADP13716 330 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 DRD4P21917 467 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 PPP2R2AP63151 447 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 LACTBP83111 547 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 RNASELQ05823 741 aaKnown RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 KIF5AQ12840 1032 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ZNF274Q96GC6 653 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 KRT12Q99456 494 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ARHGEF38Q9NXL2 777 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 HSFX1Q9UBD0 423 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 TMED5Q9Y3A6 229 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 CAPN6Q9Y6Q1 641 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ADAMTSL1Q8N6G6 1762 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 SHBGP04278 402 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 GOLGA8HP0CJ92 632 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 GHRP10912 638 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 VEGFAP15692 232 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 RASSF7Q02833 373 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 KRT72Q14CN4 511 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 KLHL7Q8IXQ5 586 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 CHMP6Q96FZ7 201 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
SF3B2-201ENST00000322535 TMBIM4Q9HC24 238 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 PFDN4Q9NQP4 134 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 AASDHPPTQ9NRN7 309 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ATP8A2Q9NTI2 1148 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 ETNK2Q9NVF9 386 aa11.12□□□□□ -0.63
SF3B2-201ENST00000322535 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■□□ 15
SF3B2-201ENST00000322535 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms