RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 PMS2P54278 862 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 TRPC3Q13507 836 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 AP1ARQ63HQ0 302 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 RIOK1Q9BRS2 568 aaKnown RBP17.68■□□□□ 0.42
SFXN1-201ENST00000321442 ADAM33Q9BZ11 813 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 PITPNM3Q9BZ71 974 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 NR3C1P04150 777 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 RASA1P20936 1047 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 ADCY2Q08462 1091 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 RCN2Q14257 317 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 MDM1Q8TC05 714 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 P3H4Q92791 437 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 GLG1Q92896 1179 aa17.68■□□□□ 0.42
SFXN1-201ENST00000321442 PDS5AQ29RF7 1337 aaKnown RBP17.67■□□□□ 0.42
SFXN1-201ENST00000321442 BFSP1Q12934 665 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 RSAD2Q8WXG1 361 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
SFXN1-201ENST00000321442 ANO3Q9BYT9 981 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 TRIM49P0CI25 452 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 TRIM49CP0CI26 452 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 STRN3Q13033 797 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 SYDE2Q5VT97 1194 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 AMIGO3Q86WK7 504 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 POMGNT1Q8WZA1 660 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 PARVGQ9HBI0 331 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 EXOC1LA0A1B0GW35 172 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 CLGNO14967 610 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 RASA3Q14644 834 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 GRM4Q14833 912 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
SFXN1-201ENST00000321442 NLRX1Q86UT6 975 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 DNAAF5Q86Y56 855 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 MMGT1Q8N4V1 131 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
SFXN1-201ENST00000321442 RAB20Q9NX57 234 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 IVNS1ABPQ9Y6Y0 642 aa17.67■□□□□ 0.42
SFXN1-201ENST00000321442 SLC9A1P19634 815 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 COPB2P35606 906 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 DRAP1Q14919 205 aaPredicted RBP17.66■□□□□ 0.42
SFXN1-201ENST00000321442 QRICH1Q2TAL8 776 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 ADGRF4Q8IZF3 695 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 YIPF3Q9GZM5 350 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 RAVER2Q9HCJ3 691 aaKnown RBP17.66■□□□□ 0.42
SFXN1-201ENST00000321442 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 MYCP01106 439 aaPredicted RBP17.66■□□□□ 0.42
SFXN1-201ENST00000321442 KRT19P08727 400 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 FGFR4P22455 802 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 MXI1P50539 228 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 DCAF15Q66K64 600 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 SREK1Q8WXA9 508 aaKnown RBP17.66■□□□□ 0.42
SFXN1-201ENST00000321442 NT5C1BQ96P26 610 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 NFAT5O94916 1531 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 PNMA6FA0A0J9YX94 578 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 MAP2K7O14733 419 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 PSMC4P43686 418 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 SARSP49591 514 aaKnown RBP17.66■□□□□ 0.42
SFXN1-201ENST00000321442 SEPT14Q6ZU15 432 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 VGLL2Q8N8G2 317 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 NEDD1Q8NHV4 660 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 CYFIP2Q96F07 1278 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 DDX23Q9BUQ8 820 aaKnown RBP17.66■□□□□ 0.42
SFXN1-201ENST00000321442 CNTNAP5Q8WYK1 1306 aa17.66■□□□□ 0.42
SFXN1-201ENST00000321442 A0A087X0T9 212 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 FAM228BP0C875 321 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 GCLMP48507 274 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 BRAFP15056 766 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 POLE2P56282 527 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 DYNLT1P63172 113 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 NBPF9Q3BBW0 867 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 SLC10A5Q5PT55 438 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 PAPD7Q5XG87 772 aaKnown RBP17.65■□□□□ 0.42
SFXN1-201ENST00000321442 TMEM179Q6ZVK1 233 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 PDCD7Q8N8D1 485 aaKnown RBP17.65■□□□□ 0.42
SFXN1-201ENST00000321442 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.65■□□□□ 0.42
SFXN1-201ENST00000321442 ETNK1Q9HBU6 452 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 FOSP01100 380 aaPredicted RBP17.65■□□□□ 0.42
SFXN1-201ENST00000321442 PDHA1P08559 390 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 ERFP50548 548 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 PTK2Q05397 1052 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 ITIH3Q06033 890 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 PHLDB3Q6NSJ2 640 aa17.65■□□□□ 0.42
SFXN1-201ENST00000321442 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
SFXN1-201ENST00000321442 SSU72P8A0A1W2PR75 194 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 GRID2IPA4D2P6 1211 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 ORC4O43929 436 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 OPHN1O60890 802 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.42
SFXN1-201ENST00000321442 RAB3IL1Q8TBN0 382 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 SPDL1Q96EA4 605 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 DNAJC7Q99615 494 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 FZD1Q9UP38 647 aa17.64■□□□□ 0.42
SFXN1-201ENST00000321442 POLRMTO00411 1230 aaKnown RBP17.64■□□□□ 0.41
SFXN1-201ENST00000321442 HNRNPDLO14979 420 aaKnown RBP17.64■□□□□ 0.41
SFXN1-201ENST00000321442 HSPA6P17066 643 aa17.64■□□□□ 0.41
SFXN1-201ENST00000321442 PTGISQ16647 500 aa17.64■□□□□ 0.41
SFXN1-201ENST00000321442 KNOP1Q1ED39 458 aaKnown RBP17.64■□□□□ 0.41
SFXN1-201ENST00000321442 SEC16BQ96JE7 1060 aa17.64■□□□□ 0.41
SFXN1-201ENST00000321442 PPP1R16BQ96T49 567 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms