RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SPAG7O75391 227 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 FCER1AP12319 257 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 EIF2AK2P19525 551 aaKnown RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 ERICH1Q86X53 443 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 GFM2Q969S9 779 aaKnown RBP17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 ZFP69BQ9UJL9 534 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 USP21Q9UK80 565 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 NUB1Q9Y5A7 615 aa17.61■□□□□ 0.41
SH3RF1-201ENST00000284637 ERVV-1B6SEH8 477 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 MED7O43513 233 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 KRT37O76014 449 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 RAB44Q7Z6P3 723 aaPredicted RBP17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 PACS2Q86VP3 889 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 SH2D3CQ8N5H7 860 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 SLC44A5Q8NCS7 719 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 ZBTB10Q96DT7 871 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 TMEM260Q9NX78 707 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 ZNF711Q9Y462 761 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 POTEB3A0JP26 581 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 ARHGAP10A1A4S6 786 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 POTECB2RU33 542 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 TJP3O95049 919 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 APBA3O96018 575 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 SRGAP2BP0DMP2 458 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 GUCY1A2P33402 732 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 POTEBQ6S5H4 581 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 PASD1Q8IV76 773 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 PIGBQ92521 554 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 TMEM60Q9H2L4 133 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 PSMA2P25787 234 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 FMR1Q06787 632 aaKnown RBP eCLIP17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 TMTC4Q5T4D3 741 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 RSRC2Q7L4I2 434 aaKnown RBP17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 LCA5Q86VQ0 697 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 ZNF233A6NK53 670 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 CYB5D1Q6P9G0 228 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 LRRC37BQ96QE4 947 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 SMYD3Q9H7B4 428 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 KIF9Q9HAQ2 790 aa17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 NOC2LQ9Y3T9 749 aaKnown RBP17.6■□□□□ 0.41
SH3RF1-201ENST00000284637 SLC4A1P02730 911 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 SCP2P22307 547 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 APLFQ8IW19 511 aaPredicted RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 RNF25Q96BH1 459 aaPredicted RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 FAF2Q96CS3 445 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 ALDH8A1Q9H2A2 487 aaPredicted RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 NGRNQ9NPE2 291 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 LIMA1Q9UHB6 759 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 AMACRQ9UHK6 382 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 FNDC3AQ9Y2H6 1198 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 WDR64B1ANS9 1081 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 FAM107AO95990 144 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 ARL4CP56559 192 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 TRMT10CQ7L0Y3 403 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 INPP5FQ9Y2H2 1132 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 PLEKHG1Q9ULL1 1385 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 ZNF18P17022 549 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 CC2D2BQ6DHV5 1058 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 HEXIM2Q96MH2 286 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 SERPINI1Q99574 410 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 PI4KBQ9UBF8 816 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 PCYT1AP49585 367 aa17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 TSTA3Q13630 321 aaPredicted RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 THOC5Q13769 683 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 WDR75Q8IWA0 830 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 TGS1Q96RS0 853 aaKnown RBP17.59■□□□□ 0.41
SH3RF1-201ENST00000284637 KITP10721 976 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 PPP6R3Q5H9R7 873 aaPredicted RBP17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 EEPD1Q7L9B9 569 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 MXD3Q9BW11 206 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 WDR70Q9NW82 654 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 CAPN11Q9UMQ6 739 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 GRID2IPA4D2P6 1211 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 SNUPNO95149 360 aaKnown RBP17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 DRAP1Q14919 205 aaPredicted RBP17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.41
SH3RF1-201ENST00000284637 A0A1W2PQC6 194 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 K7ERI5 159 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 CNGA1P29973 690 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 GLYCTKQ8IVS8 523 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 C11orf70Q9BRQ4 267 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 MSTO1Q9BUK6 570 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 SNX25Q9H3E2 840 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 BSDC1Q9NW68 430 aaPredicted RBP17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 ANGPTL3Q9Y5C1 460 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 HSPA4LO95757 839 aa17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 CHCHD3Q9NX63 227 aaKnown RBP17.58■□□□□ 0.4
SH3RF1-201ENST00000284637 ZBBXA8MT70 800 aa17.57■□□□□ 0.4
SH3RF1-201ENST00000284637 SERPINB2P05120 415 aa17.57■□□□□ 0.4
SH3RF1-201ENST00000284637 TSGA10IPQ3SY00 556 aa17.57■□□□□ 0.4
SH3RF1-201ENST00000284637 GGT7Q9UJ14 662 aa17.57■□□□□ 0.4
SH3RF1-201ENST00000284637 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
SH3RF1-201ENST00000284637 HAUS5O94927 633 aa17.57■□□□□ 0.4
SH3RF1-201ENST00000284637 FTLP02792 175 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms