RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 RNPEPQ9H4A4 650 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 C11orf49Q9H6J7 331 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 WRAP73Q9P2S5 460 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-220ENST00000641570 COL4A3BPQ9Y5P4 624 aa14.37□□□□□ -0.11
PHGDH-220ENST00000641570 A0A087WWV3 80 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 A0A087X0B3 334 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 ACTN4O43707 911 aaKnown RBP14.36□□□□□ -0.11
PHGDH-220ENST00000641570 GAP43P17677 238 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 SLC12A3P55017 1021 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 E2F4Q16254 413 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 TAF2Q6P1X5 1199 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 PSPC1Q8WXF1 523 aaKnown RBP14.36□□□□□ -0.11
PHGDH-220ENST00000641570 DDX12PQ92771 950 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 SH2D3AQ9BRG2 576 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 LARSQ9P2J5 1176 aaKnown RBP14.36□□□□□ -0.11
PHGDH-220ENST00000641570 ODF2LQ9ULJ1 636 aa14.36□□□□□ -0.11
PHGDH-220ENST00000641570 TMEM150BA6NC51 233 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 H0YCG3 227 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 KIF20AO95235 890 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 CYP2C9P11712 490 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 CYP11B2P19099 503 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 KLRC1P26715 233 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 ABCD1P33897 745 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 IRX5P78411 483 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-220ENST00000641570 CDC42EP1Q00587 391 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 SNW1Q13573 536 aaKnown RBP14.35□□□□□ -0.11
PHGDH-220ENST00000641570 STIM1Q13586 685 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 PTGISQ16647 500 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 TMEM132AQ24JP5 1023 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 L1TD1Q5T7N2 865 aaKnown RBP14.35□□□□□ -0.11
PHGDH-220ENST00000641570 RINT1Q6NUQ1 792 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 EFCAB12Q6NXP0 572 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 CNNM4Q6P4Q7 775 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 MTHFD1LQ6UB35 978 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 SASS6Q6UVJ0 657 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 KCNK18Q7Z418 384 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 TNS4Q8IZW8 715 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 MYCT1Q8N699 235 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 SLC17A8Q8NDX2 589 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 GPT2Q8TD30 523 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 LMBR1Q8WVP7 490 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 STAMQ92783 540 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 KAT2BQ92831 832 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 CRISPLD2Q9H0B8 497 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 POLR3FQ9H1D9 316 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-220ENST00000641570 BLZF1Q9H2G9 400 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 BLOC1S4Q9NUP1 217 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 KBTBD4Q9NVX7 518 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 HDAC6Q9UBN7 1215 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 GTF2IRD1Q9UHL9 959 aa14.35□□□□□ -0.11
PHGDH-220ENST00000641570 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 DCDC2CA8MYV0 355 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ARVCFO00192 962 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 HAS3O00219 553 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ZBTB39O15060 712 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 HIP1RO75146 1068 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 MAFO75444 373 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ATP4AP20648 1035 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 GUCY2CP25092 1073 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ATN1P54259 1190 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 MXD4Q14582 209 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 HERC4Q5GLZ8 1057 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 IER5Q5VY09 327 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 CCSAPQ6IQ19 270 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ZBTB8OSQ8IWT0 167 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ELOA2Q8IYF1 753 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 GRAMD1CQ8IYS0 662 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 ENGASEQ8NFI3 743 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 DEPTORQ8TB45 409 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 TRAPPC12Q8WVT3 735 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 NLRP7Q8WX94 980 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 C7orf25Q9BPX7 421 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 FAM49AQ9H0Q0 323 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 PANK4Q9NVE7 773 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 SUCLA2Q9P2R7 463 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-220ENST00000641570 PHLPP2Q6ZVD8 1323 aa14.34□□□□□ -0.11
PHGDH-220ENST00000641570 CCDC169A6NNP5 214 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 ASAP2O43150 1006 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 PQBP1O60828 265 aaKnown RBP14.33□□□□□ -0.12
PHGDH-220ENST00000641570 RPN1P04843 607 aaKnown RBP14.33□□□□□ -0.12
PHGDH-220ENST00000641570 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-220ENST00000641570 PNOCQ13519 176 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 NAALADL2Q58DX5 795 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 ODR4Q5SWX8 454 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 UNC13DQ70J99 1090 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 SESTD1Q86VW0 696 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 RHPN2Q8IUC4 686 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 LRRC71Q8N4P6 559 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 REEP2Q9BRK0 252 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 C17orf75Q9HAS0 396 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 SEL1LQ9UBV2 794 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 PRKAG2Q9UGJ0 569 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms