RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 HEMGNQ9BXL5 484 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 LACRTQ9GZZ8 138 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 PSD3Q9NYI0 1048 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 DIS3Q9Y2L1 958 aaKnown RBP17.93■□□□□ 0.46
SCARB2-210ENST00000638567 MAD1L1Q9Y6D9 718 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 RAD17O75943 681 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 INHBAP08476 426 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 CA4P22748 312 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 CDKAL1Q5VV42 579 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 PADI6Q6TGC4 694 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 CFAP61Q8NHU2 1237 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 RNF34Q969K3 372 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 RGL1Q9NZL6 768 aa17.93■□□□□ 0.46
SCARB2-210ENST00000638567 P4HA1P13674 534 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 PMS2P54278 862 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 YARSP54577 528 aaKnown RBP17.92■□□□□ 0.46
SCARB2-210ENST00000638567 HDLBPQ00341 1268 aaKnown RBP17.92■□□□□ 0.46
SCARB2-210ENST00000638567 RPUSD2Q8IZ73 545 aaKnown RBP17.92■□□□□ 0.46
SCARB2-210ENST00000638567 THOC1Q96FV9 657 aaKnown RBP17.92■□□□□ 0.46
SCARB2-210ENST00000638567 ERGIC2Q96RQ1 377 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 SCYL3Q8IZE3 742 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 RFFLQ8WZ73 363 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 SLITRK6Q9H5Y7 841 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 CHUKO15111 745 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 BAG2O95816 211 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 IRAK1P51617 712 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 USP11P51784 963 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 RCSD1Q6JBY9 416 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 DNAJC24Q6P3W2 148 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 FBXO33Q7Z6M2 555 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 PAGR1Q9BTK6 254 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 TDRD3Q9H7E2 651 aaKnown RBP17.92■□□□□ 0.46
SCARB2-210ENST00000638567 SEC23AQ15436 765 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 PHLDB3Q6NSJ2 640 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 CFAP57Q96MR6 1250 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 PLAGL2Q9UPG8 496 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 TTLL3Q9Y4R7 772 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 SLIT1O75093 1534 aa17.92■□□□□ 0.46
SCARB2-210ENST00000638567 UCHL3P15374 230 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 KLRC1P26715 233 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 POLD1P28340 1107 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 PRELPP51888 382 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 NKX1-1Q15270 411 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-210ENST00000638567 MTERF2Q49AM1 385 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 FRMD5Q7Z6J6 570 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 KDM6AO15550 1401 aaPredicted RBP17.91■□□□□ 0.46
SCARB2-210ENST00000638567 WDR91A4D1P6 747 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 EIF3HO15372 352 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCARB2-210ENST00000638567 CD58P19256 250 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 NMT1P30419 496 aaKnown RBP17.91■□□□□ 0.46
SCARB2-210ENST00000638567 ZNF543Q08ER8 600 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 ALCAMQ13740 583 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 GEN1Q17RS7 908 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 FAM47EQ6ZV65 393 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 RNPC3Q96LT9 517 aaKnown RBP17.91■□□□□ 0.46
SCARB2-210ENST00000638567 INTS2Q9H0H0 1204 aaKnown RBP17.91■□□□□ 0.46
SCARB2-210ENST00000638567 GOLPH3Q9H4A6 298 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 MEGF6O75095 1541 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 FLT1P17948 1338 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 VCX3BQ9H321 246 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 BCS1LQ9Y276 419 aa17.91■□□□□ 0.46
SCARB2-210ENST00000638567 SLC9A1P19634 815 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 NFIXQ14938 502 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 EARS2Q5JPH6 523 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 TRAPPC11Q7Z392 1133 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 EIF2AK1Q9BQI3 630 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 H3BQF6 201 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 PPP2R5AQ15172 486 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 RFX6Q8HWS3 928 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 RIOK1Q9BRS2 568 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 FAM217BQ9NTX9 383 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 PDXKO00764 312 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 KLRK1P26718 216 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 BASP1P80723 227 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 TFAMQ00059 246 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 ACTN3Q08043 901 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 PSMD6Q15008 389 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 ZNF449Q6P9G9 518 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 RSRC2Q7L4I2 434 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 SRRM1Q8IYB3 904 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 AS3MTQ9HBK9 375 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 CPSF2Q9P2I0 782 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 NXF1Q9UBU9 619 aaKnown RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 OVOS2A0A0G2JMS6 1433 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 LRRIQ3A6PVS8 624 aaPredicted RBP17.9■□□□□ 0.46
SCARB2-210ENST00000638567 TTI1O43156 1089 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 SOX5P35711 763 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 BBS9Q3SYG4 887 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 OR2W6PQ8NHA6 318 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 HAUS1Q96CS2 278 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 ZIM3Q96PE6 472 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 DNAJC7Q99615 494 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 CALN1Q9BXU9 219 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 NRBP2Q9NSY0 501 aa17.9■□□□□ 0.46
SCARB2-210ENST00000638567 A0A1W2PQJ5 194 aa17.89■□□□□ 0.45
SCARB2-210ENST00000638567 ZNF233A6NK53 670 aa17.89■□□□□ 0.45
SCARB2-210ENST00000638567 SLC16A4O15374 487 aa17.89■□□□□ 0.45
SCARB2-210ENST00000638567 ZRANB2O95218 330 aaKnown RBP eCLIP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms