RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 KSR1Q8IVT5 923 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 MORC4Q8TE76 937 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 PANX2Q96RD6 677 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 BAG1Q99933 345 aaPredicted RBP23.62■■□□□ 1.37
SPAST-204ENST00000621856 ZMYM2Q9UBW7 1377 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 NR3C1P04150 777 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 ALCAMQ13740 583 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 SYCP1Q15431 976 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 METTL7BQ6UX53 244 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 GPRC5CQ9NQ84 441 aa23.62■■□□□ 1.37
SPAST-204ENST00000621856 DDX41Q9UJV9 622 aaKnown RBP23.62■■□□□ 1.37
SPAST-204ENST00000621856 MAFBQ9Y5Q3 323 aaPredicted RBP23.62■■□□□ 1.37
SPAST-204ENST00000621856 GSTTP1A0A1W2PQM5 241 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 STRNO43815 780 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 ARIH2O95376 493 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 FXR1P51114 621 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPAST-204ENST00000621856 ZNF792Q3KQV3 632 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 FAM160B1Q5W0V3 765 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 ABRAQ8N0Z2 381 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 CCDC51Q96ER9 411 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 CYP26B1Q9NR63 512 aa23.61■■□□□ 1.37
SPAST-204ENST00000621856 CLIC2O15247 247 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 OATP04181 439 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 MARSP56192 900 aaKnown RBP23.6■■□□□ 1.37
SPAST-204ENST00000621856 FAM110CQ1W6H9 321 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 MTERF2Q49AM1 385 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 ARMCX2Q7L311 632 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 HS2ST1Q7LGA3 356 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 SYCP3Q8IZU3 236 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 SEPT1Q8WYJ6 367 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 ERGIC2Q96RQ1 377 aa23.6■■□□□ 1.37
SPAST-204ENST00000621856 MANSC4A6NHS7 340 aaPredicted RBP23.59■■□□□ 1.37
SPAST-204ENST00000621856 TGFB1I1O43294 461 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 PPP1R37O75864 691 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 KCNJ6P48051 423 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 PEX3P56589 373 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 DNTTIP2Q5QJE6 756 aaKnown RBP23.59■■□□□ 1.37
SPAST-204ENST00000621856 TMEM139Q8IV31 216 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 KIFAP3Q92845 792 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 NUP58Q9BVL2 599 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.59■■□□□ 1.37
SPAST-204ENST00000621856 IGKV6D-21A0A0A0MT36 114 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 ARHGAP6O43182 974 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 STX10O60499 249 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 DGAT1O75907 488 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 CELF3Q5SZQ8 465 aaKnown RBP23.59■■□□□ 1.37
SPAST-204ENST00000621856 RGMBQ6NW40 437 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 GPR142Q7Z601 462 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 TRIM59Q8IWR1 403 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 MCPH1Q8NEM0 835 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 STRA6Q9BX79 667 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 GBP3Q9H0R5 595 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 IKZF4Q9H2S9 585 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 ATP6V0A4Q9HBG4 840 aa23.59■■□□□ 1.37
SPAST-204ENST00000621856 NOP56O00567 594 aaKnown RBP23.58■■□□□ 1.37
SPAST-204ENST00000621856 EPB41P11171 864 aaKnown RBP23.58■■□□□ 1.37
SPAST-204ENST00000621856 ATP4AP20648 1035 aa23.58■■□□□ 1.37
SPAST-204ENST00000621856 TCF7P36402 384 aaPredicted RBP23.58■■□□□ 1.37
SPAST-204ENST00000621856 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.58■■□□□ 1.37
SPAST-204ENST00000621856 FRMD5Q7Z6J6 570 aa23.58■■□□□ 1.37
SPAST-204ENST00000621856 DHX37Q8IY37 1157 aaKnown RBP23.58■■□□□ 1.37
SPAST-204ENST00000621856 SLC17A8Q8NDX2 589 aa23.58■■□□□ 1.37
SPAST-204ENST00000621856 GOLGA5Q8TBA6 731 aa23.58■■□□□ 1.37
SPAST-204ENST00000621856 ACCSQ96QU6 501 aa23.58■■□□□ 1.37
SPAST-204ENST00000621856 SLC16A4O15374 487 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 SLC16A3O15427 465 aaKnown RBP23.57■■□□□ 1.36
SPAST-204ENST00000621856 TXNP10599 105 aaKnown RBP23.57■■□□□ 1.36
SPAST-204ENST00000621856 TRIM21P19474 475 aaKnown RBP23.57■■□□□ 1.36
SPAST-204ENST00000621856 MAPK4P31152 587 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 KRT9P35527 623 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 KLK7P49862 253 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 STAT5BP51692 787 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 DMP1Q13316 513 aaPredicted RBP23.57■■□□□ 1.36
SPAST-204ENST00000621856 TTLL4Q14679 1199 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 NFIL3Q16649 462 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 PLEKHH3Q7Z736 793 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 DPP9Q86TI2 863 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 SAPCD2Q86UD0 394 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 SCFD2Q8WU76 684 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 PCYT2Q99447 389 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 AZI2Q9H6S1 392 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 TMEM206Q9H813 350 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 TRMT1Q9NXH9 659 aaKnown RBP23.57■■□□□ 1.36
SPAST-204ENST00000621856 ARMCX3Q9UH62 379 aaPredicted RBP23.57■■□□□ 1.36
SPAST-204ENST00000621856 FAM184BQ9ULE4 1060 aa23.57■■□□□ 1.36
SPAST-204ENST00000621856 TTC26A0AVF1 554 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 CCDC169A6NNP5 214 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 OFD1O75665 1012 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 SMTNP53814 917 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 POLGP54098 1239 aaPredicted RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 NCKAP1LP55160 1127 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 CCDC62Q6P9F0 684 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 HAUS6Q7Z4H7 955 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 CCAR2Q8N163 923 aaKnown RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 RETREG2Q8NC44 543 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 NAA15Q9BXJ9 866 aaKnown RBP23.56■■□□□ 1.36
SPAST-204ENST00000621856 PDGFCQ9NRA1 345 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 AGPAT3Q9NRZ7 376 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 NRBP2Q9NSY0 501 aa23.56■■□□□ 1.36
SPAST-204ENST00000621856 ABHD10Q9NUJ1 306 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms