RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TTI1	O43156	1089 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	SNHG28	P0DPA3	235 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	HSD17B3	P37058	310 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	CLK2	P49760	499 aa	Known RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	SLC12A3	P55017	1021 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	GABPA	Q06546	454 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	QPCT	Q16769	361 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	CDC42EP5	Q6NZY7	148 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	ARFGAP2	Q8N6H7	521 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	SGSM3	Q96HU1	749 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	OSGEP	Q9NPF4	335 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	TPX2	Q9ULW0	747 aa	Known RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	GMNC	A6NCL1	334 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	ZBTB39	O15060	712 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	LRRN2	O75325	713 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	ECM2	O94769	699 aa	Predicted RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	FAM13A	O94988	1023 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	NMT1	P30419	496 aa	Known RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	E2F5	Q15329	346 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	CERKL	Q49MI3	558 aa	Predicted RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	ANKRD20A8P	Q5CZ79	823 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	SLFN12	Q8IYM2	578 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	RUSC1	Q9BVN2	902 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	DBNDD1	Q9H9R9	158 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	FBXL5	Q9UKA1	691 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	GAK	O14976	1311 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	FLT3	P36888	993 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	ZNF211	Q13398	564 aa	Predicted RBP	15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	LLGL1	Q15334	1064 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	PPP1R18	Q6NYC8	613 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	RREB1	Q92766	1687 aa		15.73	■□□□□ 0.11
SMTN-223	ENST00000619644	TLDC2	A0PJX2	215 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	RPL13	P26373	211 aa	Known RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	USP11	P51784	963 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	UHMK1	Q8TAS1	419 aa	Known RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	FAM163A	Q96GL9	167 aa	Predicted RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	PKD2L1	Q9P0L9	805 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	FAM86B1	E9PN63	330 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	BBOX1	O75936	387 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	FGG	P02679	453 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	FAM86B2	P0C5J1	330 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	EZR	P15311	586 aa	Known RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	HSPA9	P38646	679 aa	Known RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	KRT71	Q3SY84	523 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	TEKT1	Q969V4	418 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	TRIM51	Q9BSJ1	452 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	NEUROG2	Q9H2A3	272 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	NOVA2	Q9UNW9	492 aa	Known RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	ATP8A1	Q9Y2Q0	1164 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	RABGAP1	Q9Y3P9	1069 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	CFB	P00751	764 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	TRIM49	P0CI25	452 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	TRIM49C	P0CI26	452 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	KRT13	P13646	458 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	STAT1	P42224	750 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	EDRF1	Q3B7T1	1238 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	CCDC50	Q8IVM0	306 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	TPCN2	Q8NHX9	752 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	KCNQ5	Q9NR82	932 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	SWAP70	Q9UH65	585 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	CHORDC1	Q9UHD1	332 aa	Predicted RBP	15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	SLC12A6	Q9UHW9	1150 aa		15.72	■□□□□ 0.11
SMTN-223	ENST00000619644	MYH7B	A7E2Y1	1941 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	MAST2	Q6P0Q8	1798 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PPEF1	O14829	653 aa	Predicted RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	TRAPPC3	O43617	180 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PPP1R12B	O60237	982 aa	Predicted RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	GALC	P54803	685 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	ICA1	Q05084	483 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	DHX9	Q08211	1270 aa	Known RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	COG2	Q14746	738 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	FBXO11	Q86XK2	927 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	P2RX7	Q99572	595 aa	Known RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	15.71	■□□□□ 0.11	8e-7	■■■■□ 25.1
SMTN-223	ENST00000619644	TNRC6C	Q9HCJ0	1690 aa	Known RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	OPLAH	O14841	1288 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PAX7	P23759	505 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	SCTR	P47872	440 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PPP2R5A	Q15172	486 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PPP4R3CP	Q6ZMV5	832 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	FRMD5	Q7Z6J6	570 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	DHX37	Q8IY37	1157 aa	Known RBP	15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	FAM186B	Q8IYM0	893 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	LMBR1	Q8WVP7	490 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	LRRC45	Q96CN5	670 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	FAXDC2	Q96IV6	333 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	SEC16B	Q96JE7	1060 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PBK	Q96KB5	322 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	ISCU	Q9H1K1	167 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	KCNMB3	Q9NPA1	279 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	PLCB1	Q9NQ66	1216 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	LRRC4B	Q9NT99	713 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	AMFR	Q9UKV5	643 aa		15.71	■□□□□ 0.11
SMTN-223	ENST00000619644	FRMD3	A2A2Y4	597 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	EVI5	O60447	810 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	CLNS1A	P54105	237 aa	Known RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	NAP1L4	Q99733	375 aa	Known RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	AMN	Q9BXJ7	453 aa		15.7	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms