RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 PIF1Q9H611 641 aa6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 RIC8AQ9NPQ8 531 aa6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 DDX21Q9NR30 783 aaKnown RBP eCLIP6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 PDRG1Q9NUG6 133 aa6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 MTUS1Q9ULD2 1270 aa6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 PCDHGB3Q9Y5G1 929 aa6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 SPO11Q9Y5K1 396 aa6.49□□□□□ -1.37
LSM1P2-201ENST00000604911 UHRF1BP1LA0JNW5 1464 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 ETV2O00321 342 aaPredicted RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 CYTH3O43739 400 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 MYL3P08590 195 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 PDGFRBP09619 1106 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 TMEM253P0C7T8 217 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 TROVE2P10155 538 aaKnown RBP eCLIP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 SFTPCP11686 197 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 PDE6BP35913 854 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 ETV3P41162 512 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 LIG3P49916 1009 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 COPAP53621 1224 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 ARMC4Q5T2S8 1044 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 C10orf62Q5T681 223 aaPredicted RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 THOC7Q6I9Y2 204 aaKnown RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 ATG14Q6ZNE5 492 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 CLEC17AQ6ZS10 378 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 IQCA1Q86XH1 822 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 CARNMT1Q8N4J0 409 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 GIMAP8Q8ND71 665 aaPredicted RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 PPP1R13LQ8WUF5 828 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 ARHGEF2Q92974 986 aaKnown RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 C1orf74Q96LT6 269 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 SERINC2Q96SA4 455 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 TRIM8Q9BZR9 551 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 SEMA4AQ9H3S1 761 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 TCP11L1Q9NUJ3 509 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 SPTLC3Q9NUV7 552 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 TYW1Q9NV66 732 aaKnown RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 AIPL1Q9NZN9 384 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 PAIP2BQ9ULR5 123 aaKnown RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 MRFAP1Q9Y605 127 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 GAKO14976 1311 aa6.48□□□□□ -1.37
LSM1P2-201ENST00000604911 RPAP1Q9BWH6 1393 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ENO4A6NNW6 628 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 TTC34A8MYJ7 566 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CASQ2O14958 399 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 SNX2O60749 519 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 DNAJC6O75061 913 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 RECKO95980 971 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ATP5DP30049 168 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ZNF76P36508 570 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 HK2P52789 917 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 GEMIN4P57678 1058 aaKnown RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 AMPD3Q01432 767 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ROR2Q01974 943 aaKnown RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 NMIQ13287 307 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 KIF22Q14807 665 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 USH1GQ495M9 461 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CCDC38Q502W7 563 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 SMUG1Q53HV7 270 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 WDR45BQ5MNZ6 344 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ODR4Q5SWX8 454 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 SYCP2LQ5T4T6 812 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 KIAA1614Q5VZ46 1190 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CDCA2Q69YH5 1023 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CAPRIN2Q6IMN6 1127 aaKnown RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 MTHFD1LQ6UB35 978 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 UNC5DQ6UXZ4 953 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 LRRC43Q8N309 656 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ESX1Q8N693 406 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 LINC00469Q8N7U9 141 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 LILRB1Q8NHL6 650 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CCDC110Q8TBZ0 833 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 SPATA18Q8TC71 538 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CTNNBL1Q8WYA6 563 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CDKL2Q92772 493 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 HPS3Q969F9 1004 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ACSF2Q96CM8 615 aaPredicted RBP6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ALS2CR12Q96Q35 445 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 GPR62Q9BZJ7 368 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 NACAP1Q9BZK3 213 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CYP4F11Q9HBI6 524 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 PCDH18Q9HCL0 1135 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ZNF510Q9Y2H8 683 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 AK5Q9Y6K8 562 aa6.47□□□□□ -1.37
LSM1P2-201ENST00000604911 ROCK2O75116 1388 aaKnown RBP6.46□□□□□ -1.37
LSM1P2-201ENST00000604911 HNRNPCL2B2RXH8 293 aa6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 EIF3CLB5ME19 914 aaKnown RBP6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 POLR3GO15318 223 aaPredicted RBP6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 TSPAN1O60635 241 aa6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 HNRNPCL1O60812 293 aaKnown RBP6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 ZNF254O75437 659 aa6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 CYP1A2P05177 515 aa6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 KRT18P05783 430 aaKnown RBP6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 S100A6P06703 90 aa6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 TFE3P19532 575 aaPredicted RBP6.46□□□□□ -1.38
LSM1P2-201ENST00000604911 CCT6AP40227 531 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms