RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PRPHP41219 470 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 GRM2Q14416 872 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 VPS72Q15906 364 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 KCTD1Q719H9 257 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 RRAGAQ7L523 313 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 DAGLBQ8NCG7 672 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 LARP4BQ92615 738 aaKnown RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 TSG101Q99816 390 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 NUP58Q9BVL2 599 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 LACRTQ9GZZ8 138 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 TMX4Q9H1E5 349 aaPredicted RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 NLRC4Q9NPP4 1024 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 USP40Q9NVE5 1235 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 MYO1AQ9UBC5 1043 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 DUSP10Q9Y6W6 482 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 ECM29Q5VYK3 1845 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 SLC37A4O43826 429 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 PDHBP11177 359 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 RNF144AP50876 292 aaPredicted RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 HERVK_113P62684 666 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 MRPS25P82663 173 aaKnown RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 ZBED6P86452 979 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 TCP10Q12799 353 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 PAK2Q13177 524 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 GOLGA6L1Q8N7Z2 621 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 SMCR8Q8TEV9 937 aaPredicted RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 EAF1Q96JC9 268 aaPredicted RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 HSH2DQ96JZ2 352 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 CRACR2AQ9BSW2 395 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 FAM53CQ9NYF3 392 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 DOCK2Q92608 1830 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 TGFBR3LH3BV60 316 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 NKRFO15226 690 aaKnown RBP eCLIP5.91□□□□□ -1.46
VAPA-203ENST00000577539 ZNF185O15231 689 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 EGFRP00533 1210 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 PLEKP08567 350 aaPredicted RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 EPS15P42566 896 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 IGBP1P78318 339 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 FOXD4Q12950 439 aaPredicted RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 NNTQ13423 1086 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 RASA3Q14644 834 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 CCDC70Q6NSX1 233 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 WDR59Q6PJI9 974 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 ADAMTSL4Q6UY14 1074 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 TBC1D16Q8TBP0 767 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 ZNF507Q8TCN5 953 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 TBC1D22AQ8WUA7 517 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 SECISBP2LQ93073 1101 aaKnown RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 CNTNAP3BQ96NU0 1288 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 MMS19Q96T76 1030 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 C7orf25Q9BPX7 421 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 IFIH1Q9BYX4 1025 aaKnown RBP5.91□□□□□ -1.46
VAPA-203ENST00000577539 CNTNAP3Q9BZ76 1288 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 MAGEF1Q9HAY2 307 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 NPHS2Q9NP85 383 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 POLLQ9UGP5 575 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 MSRB2Q9Y3D2 182 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 ROBO1Q9Y6N7 1651 aa5.91□□□□□ -1.46
VAPA-203ENST00000577539 DDX60Q8IY21 1712 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 SPATA31C2B4DYI2 1134 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 H3BQF6 201 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 FGFR1OPO95684 399 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 MRPL12P52815 198 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 CACNB3P54284 484 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 RHBDL3P58872 404 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 GRB10Q13322 594 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 KIAA0895Q8NCT3 520 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 NDST4Q9H3R1 872 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 SEMA6BQ9H3T3 888 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 MTMR4Q9NYA4 1195 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 CALCOCO1Q9P1Z2 691 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 hCG_2014768A0A024R1R8 64 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 N4BP1O75113 896 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 TACC1O75410 805 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 HLA-DOAP06340 250 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 CXCR5P32302 372 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 EIF4A3P38919 411 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 MAGEA1P43355 309 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 CKAP4Q07065 602 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 CASP8Q14790 479 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 BEND6Q5SZJ8 279 aaPredicted RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 RASIP1Q5U651 963 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 CCDC155Q8N6L0 562 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 DNAJC7Q99615 494 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 MMTAG2Q9BU76 263 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.9□□□□□ -1.46
VAPA-203ENST00000577539 ZNF408Q9H9D4 720 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 MLXIPQ9HAP2 919 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 DDX25Q9UHL0 483 aaKnown RBP5.9□□□□□ -1.46
VAPA-203ENST00000577539 SERPINB13Q9UIV8 391 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 PCDHA12Q9UN75 941 aa5.9□□□□□ -1.46
VAPA-203ENST00000577539 BCORQ6W2J9 1755 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 GREM1O60565 184 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 BBOX1O75936 387 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 CYP2C19P33261 490 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 PPP1R2P41236 205 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 SOX9P48436 509 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 HNRNPH2P55795 449 aaKnown RBP5.9□□□□□ -1.47
VAPA-203ENST00000577539 SNAP25P60880 206 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms