RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 CST5P28325 142 aaPredicted RBP7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ERVK-21P61565 698 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ZXDAP98168 799 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 CNTN2Q02246 1040 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 TNFAIP2Q03169 654 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 GPNMBQ14956 572 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 SEC23AQ15436 765 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 IMMTQ16891 758 aaKnown RBP7.16□□□□□ -1.26
UBFD1-204ENST00000565634 SLC35G1Q2M3R5 365 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 FAM47CQ5HY64 1035 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 DGLUCYQ7Z3D6 616 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 BMP8AQ7Z5Y6 402 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 RIOX2Q8IUF8 465 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 TRIM11Q96F44 468 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 CEP95Q96GE4 821 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 FGD4Q96M96 766 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 TBC1D32Q96NH3 1257 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 TGS1Q96RS0 853 aaKnown RBP7.16□□□□□ -1.26
UBFD1-204ENST00000565634 EHD4Q9H223 541 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ALDH8A1Q9H2A2 487 aaPredicted RBP7.16□□□□□ -1.26
UBFD1-204ENST00000565634 AVENQ9NQS1 362 aaPredicted RBP7.16□□□□□ -1.26
UBFD1-204ENST00000565634 TOMM22Q9NS69 142 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 LMCD1Q9NZU5 365 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ARPP21Q9UBL0 812 aaPredicted RBP7.16□□□□□ -1.26
UBFD1-204ENST00000565634 CLIP2Q9UDT6 1046 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 CTNNA3Q9UI47 895 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ZMYM6O95789 1325 aa7.16□□□□□ -1.26
UBFD1-204ENST00000565634 ATRXP46100 2492 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 PIK3R2O00459 728 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 MBTPS2O43462 519 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 PRC1O43663 620 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 PRMT3O60678 531 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 DKK1O94907 266 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 LARGE1O95461 756 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 SLC25A27O95847 323 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 MYL3P08590 195 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 EEF2P13639 858 aaKnown RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 KCNJ6P48051 423 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 WDR5P61964 334 aaKnown RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 TAGLNQ01995 201 aaKnown RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 ZNF211Q13398 564 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 TOB2Q14106 344 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 FSCN1Q16658 493 aaKnown RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 ZNF468Q5VIY5 522 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 ARMCX2Q7L311 632 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 RPAINQ86UA6 219 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 CERS3Q8IU89 383 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 NPAS4Q8IUM7 802 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 CCDC144CPQ8IYA2 1237 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 KIAA2013Q8IYS2 634 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 ZNF444Q8N0Y2 327 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 ENAHQ8N8S7 591 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 PHOSPHO2Q8TCD6 241 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 IL17RAQ96F46 866 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 TTC14Q96N46 770 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 NEK1Q96PY6 1258 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 MYL10Q9BUA6 226 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 CPVLQ9H3G5 476 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 GINM1Q9NU53 330 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 MTMR4Q9NYA4 1195 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 SCHIP1Q9P0W5 487 aaPredicted RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 DIS3Q9Y2L1 958 aaKnown RBP7.15□□□□□ -1.26
UBFD1-204ENST00000565634 TNKSO95271 1327 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 ROBO3Q96MS0 1386 aa7.15□□□□□ -1.26
UBFD1-204ENST00000565634 CEP250Q9BV73 2442 aa7.15□□□□□ -1.27
UBFD1-204ENST00000565634 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 VWA5AO00534 786 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 RXRAP19793 462 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 RPS6KB1P23443 525 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 SP100P23497 879 aaPredicted RBP7.14□□□□□ -1.27
UBFD1-204ENST00000565634 NOVP48745 357 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 SNAP25P60880 206 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 PDE4BQ07343 736 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 APOBRQ0VD83 1088 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 GPM6BQ13491 265 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 TTBK2Q6IQ55 1244 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 Q6ZUG5 572 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 RUFY3Q7L099 469 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 TLK2Q86UE8 772 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 CMTR1Q8N1G2 835 aaKnown RBP7.14□□□□□ -1.27
UBFD1-204ENST00000565634 LRRC47Q8N1G4 583 aaKnown RBP7.14□□□□□ -1.27
UBFD1-204ENST00000565634 Q8N3U1 123 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 PABPC5Q96DU9 382 aaKnown RBP7.14□□□□□ -1.27
UBFD1-204ENST00000565634 PRIMPOLQ96LW4 560 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 MDFIQ99750 246 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 TMEM47Q9BQJ4 181 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 TANC1Q9C0D5 1861 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 KATNBL1Q9H079 304 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 LY9Q9HBG7 655 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 RAVER2Q9HCJ3 691 aaKnown RBP7.14□□□□□ -1.27
UBFD1-204ENST00000565634 CHD8Q9HCK8 2581 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 ZNF358Q9NW07 568 aa7.14□□□□□ -1.27
UBFD1-204ENST00000565634 NOP53Q9NZM5 478 aaKnown RBP7.14□□□□□ -1.27
UBFD1-204ENST00000565634 MARK1Q9P0L2 795 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms