RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 GNPTABQ3T906 1256 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 IWS1Q96ST2 819 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 RASSF4Q9H2L5 321 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 L1RE1Q9UN81 338 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 ARHGEF35A5YM69 484 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 BTBD19C9JJ37 291 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 SLC25A27O95847 323 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 ABL1P00519 1130 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 MUTP22033 750 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 ERVK-9P63128 1117 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 ERVK-24P63145 666 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 KCTD17Q8N5Z5 321 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 BRI3BPQ8WY22 251 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 NAA15Q9BXJ9 866 aaKnown RBP16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 PORCNQ9H237 461 aa16.8■□□□□ 0.28
CLPTM1-202ENST00000541297 MAFGO15525 162 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 MYBP10242 640 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 CETPP11597 493 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 CASP14P31944 242 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 GTF2A2P52657 109 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 CST9Q5W186 159 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 SLC35F6Q8N357 371 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 MYH9P35579 1960 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 CTAGE9A4FU28 777 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 ERLIN1O75477 346 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 EIF3JO75822 258 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 FAM13AO94988 1023 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 PBX1P40424 430 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 JAK3P52333 1124 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 SRLQ86TD4 932 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 ANKRD13CQ8N6S4 541 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 FAM133AQ8N9E0 248 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 JPH1Q9HDC5 661 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 PNMA3Q9UL41 463 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 FAN1Q9Y2M0 1017 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 CENPFP49454 3210 aa16.79■□□□□ 0.28
CLPTM1-202ENST00000541297 LRRC10BA6NIK2 292 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 SPATA31C2B4DYI2 1134 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 MFAP3LO75121 409 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 STAM2O75886 525 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 SFNP31947 248 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 VSNL1P62760 191 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 FKBP1BP68106 108 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 ACRBPQ8NEB7 543 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 MMP19Q99542 508 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 RRP15Q9Y3B9 282 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 GCNT3O95395 438 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 KCTD2Q14681 263 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 PLA2G4FQ68DD2 849 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 ZNF746Q6NUN9 644 aaPredicted RBP16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 PADI6Q6TGC4 694 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 CYFIP1Q7L576 1253 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 NOC3LQ8WTT2 800 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 CDHR1Q96JP9 859 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 SLC9A2Q9UBY0 812 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 PCDHA10Q9Y5I2 948 aa16.78■□□□□ 0.28
CLPTM1-202ENST00000541297 UNCXA6NJT0 531 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 FXR1P51114 621 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 UBXN1Q04323 297 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 LRRC63Q05C16 580 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 LEKR1Q6ZMV7 388 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 TSG101Q99816 390 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 TUBGCP2Q9BSJ2 902 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 MAF1Q9H063 256 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 GABBR1Q9UBS5 961 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 RSPH14Q9UHP6 348 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 LRRC37A2A6NM11 1700 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 USO1O60763 962 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 RARRES1P49788 294 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 PSMC5P62195 406 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 PARVGQ9HBI0 331 aa16.77■□□□□ 0.28
CLPTM1-202ENST00000541297 B4DLN1 442 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 GYPCP04921 128 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 NPEPPSP55786 919 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 KCNA1Q09470 495 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 SPRYD7Q5W111 196 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 SWSAP1Q6NVH7 229 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 FOXR1Q6PIV2 292 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 KCTD10Q9H3F6 313 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 HIP1RO75146 1068 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 PHACTR2O75167 634 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 TNNT3P45378 269 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 HUNKP57058 714 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 ACTR2P61160 394 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 CASP8Q14790 479 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 ZCWPW2Q504Y3 356 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
CLPTM1-202ENST00000541297 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms