RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 SLC5A5Q92911 643 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 KRT12Q99456 494 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 VIPAS39Q9H9C1 493 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 TMCO5BA8MYB1 307 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 GFPT2O94808 682 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 ZBTB7AO95365 584 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 FAM153BP0C7A2 387 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
C11orf54-214ENST00000540113 FAM153CQ494X1 144 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 CFAP221Q4G0U5 840 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 TBC1D10BQ4KMP7 808 aaPredicted RBP12.6□□□□□ -0.39
C11orf54-214ENST00000540113 MEI1Q5TIA1 1274 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 FAM83AQ86UY5 434 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 NIM1KQ8IY84 436 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 AGBL3Q8NEM8 1001 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 UNC45AQ9H3U1 944 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 STIM2Q9P246 746 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 FAM153AQ9UHL3 310 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 UTRNP46939 3433 aa12.6□□□□□ -0.39
C11orf54-214ENST00000540113 GOLGA6BA6NDN3 693 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 PLA2G6O60733 806 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 GAS7O60861 476 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 EPB41P11171 864 aaKnown RBP12.59□□□□□ -0.39
C11orf54-214ENST00000540113 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
C11orf54-214ENST00000540113 C1orf186Q6ZWK4 172 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 LDHDQ86WU2 507 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 KLHL7Q8IXQ5 586 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 VPS33BQ9H267 617 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 PSD3Q9NYI0 1048 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 NFU1Q9UMS0 254 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 STK24Q9Y6E0 443 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 WNT10BO00744 389 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 KCNK3O14649 394 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
C11orf54-214ENST00000540113 INPP5BP32019 993 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 ACTN2P35609 894 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 MAP3K10Q02779 954 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 BMT2Q1RMZ1 405 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 AFAP1L1Q8TED9 768 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 AGBL1Q96MI9 1066 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 ZNF577Q9BSK1 485 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 EPB41L5Q9HCM4 733 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 NAGPAQ9UK23 515 aa12.59□□□□□ -0.39
C11orf54-214ENST00000540113 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
C11orf54-214ENST00000540113 ZNF536O15090 1300 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 TISP43B9A030 160 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 LRRN2O75325 713 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 HEXIM1O94992 359 aaKnown RBP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 PTGER2P43116 358 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 GUCY2FP51841 1108 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 TRAF1Q13077 416 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 DNAJC21Q5F1R6 531 aaKnown RBP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 TTC19Q6DKK2 380 aaPredicted RBP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 TEX2Q8IWB9 1127 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 FAM186BQ8IYM0 893 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 U2AF1L4Q8WU68 220 aaKnown RBP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 PCDHGC5Q9Y5F6 944 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 PHF20L1A8MW92 1017 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 EGFRP00533 1210 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 PRELPP51888 382 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 CBWD6Q4V339 395 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 CEP55Q53EZ4 464 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 TUFT1Q9NNX1 390 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 LUC7LQ9NQ29 371 aaKnown RBP12.58□□□□□ -0.4
C11orf54-214ENST00000540113 PLCB1Q9NQ66 1216 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
C11orf54-214ENST00000540113 TMEM150BA6NC51 233 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 RPL13P26373 211 aaKnown RBP12.57□□□□□ -0.4
C11orf54-214ENST00000540113 ITIH3Q06033 890 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 ODR4Q5SWX8 454 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 B3GNT9Q6UX72 402 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 LRRC31Q6UY01 552 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 GOLGA5Q8TBA6 731 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 BORCS6Q96GS4 357 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 ZNF341Q9BYN7 854 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 PARVGQ9HBI0 331 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 COL20A1Q9P218 1284 aa12.57□□□□□ -0.4
C11orf54-214ENST00000540113 DDX3XO00571 662 aaKnown RBP eCLIP12.57□□□□□ -0.49e-8■■■□□ 15.2
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms