RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SGMS1Q86VZ5 419 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 CACTINQ8WUQ7 758 aaKnown RBP8□□□□□ -1.13
CCDC7-209ENST00000539197 CHFRQ96EP1 664 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 DNAJC7Q99615 494 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 CELF4Q9BZC1 486 aaKnown RBP8□□□□□ -1.13
CCDC7-209ENST00000539197 TRIM8Q9BZR9 551 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 AURKAIP1Q9NWT8 199 aaPredicted RBP8□□□□□ -1.13
CCDC7-209ENST00000539197 SNTG2Q9NY99 539 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 ASB1Q9Y576 335 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 B3GALT1Q9Y5Z6 326 aa8□□□□□ -1.13
CCDC7-209ENST00000539197 PMS2P1A4D2B8 440 aa7.99□□□□□ -1.13
CCDC7-209ENST00000539197 ADAM15Q13444 863 aa7.99□□□□□ -1.13
CCDC7-209ENST00000539197 FNDC7Q5VTL7 733 aa7.99□□□□□ -1.13
CCDC7-209ENST00000539197 SPTY2D1Q68D10 685 aaPredicted RBP7.99□□□□□ -1.13
CCDC7-209ENST00000539197 SHCBP1Q8NEM2 672 aa7.99□□□□□ -1.13
CCDC7-209ENST00000539197 CALML6Q8TD86 181 aa7.99□□□□□ -1.13
CCDC7-209ENST00000539197 GOLGA6L22H0YM25 854 aa7.98□□□□□ -1.13
CCDC7-209ENST00000539197 SLC26A4O43511 780 aa7.98□□□□□ -1.13
CCDC7-209ENST00000539197 PURAQ00577 322 aaKnown RBP7.98□□□□□ -1.13
CCDC7-209ENST00000539197 DPTQ07507 201 aa7.98□□□□□ -1.13
CCDC7-209ENST00000539197 BRAPQ7Z569 592 aa7.98□□□□□ -1.13
CCDC7-209ENST00000539197 D2HGDHQ8N465 521 aa7.98□□□□□ -1.13
CCDC7-209ENST00000539197 IGSF22Q8N9C0 903 aa7.98□□□□□ -1.13
CCDC7-209ENST00000539197 MAGEB10Q96LZ2 347 aaPredicted RBP7.98□□□□□ -1.13
CCDC7-209ENST00000539197 TUBA3CQ13748 450 aa7.97□□□□□ -1.13
CCDC7-209ENST00000539197 TRIM61Q5EBN2 209 aa7.97□□□□□ -1.13
CCDC7-209ENST00000539197 TUBA3EQ6PEY2 450 aa7.97□□□□□ -1.13
CCDC7-209ENST00000539197 THEMISQ8N1K5 641 aaPredicted RBP7.97□□□□□ -1.13
CCDC7-209ENST00000539197 FOXRED1Q96CU9 486 aaPredicted RBP7.97□□□□□ -1.13
CCDC7-209ENST00000539197 CEP89Q96ST8 783 aa7.97□□□□□ -1.13
CCDC7-209ENST00000539197 ZNF703Q9H7S9 590 aaPredicted RBP7.97□□□□□ -1.13
CCDC7-209ENST00000539197 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
CCDC7-209ENST00000539197 GIT1Q9Y2X7 761 aa7.97□□□□□ -1.13
CCDC7-209ENST00000539197 TCRBV16S1A1N1A0A5B0 115 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 SLC12A8A0AV02 714 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 E9PSI1 815 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 CYP27B1O15528 508 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 ZBTB48P10074 688 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-209ENST00000539197 APEX1P27695 318 aaKnown RBP7.96□□□□□ -1.14
CCDC7-209ENST00000539197 SDHAP31040 664 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 MAP3K12Q12852 859 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 TMEM177Q53S58 311 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 RTN4RL1Q86UN2 441 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-209ENST00000539197 NEU4Q8WWR8 484 aaPredicted RBP7.96□□□□□ -1.14
CCDC7-209ENST00000539197 IKZF4Q9H2S9 585 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 CEP72Q9P209 647 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 SFMBT1Q9UHJ3 866 aa7.96□□□□□ -1.14
CCDC7-209ENST00000539197 CAPN14A8MX76 684 aa7.95□□□□□ -1.14
CCDC7-209ENST00000539197 HIP1RO75146 1068 aa7.95□□□□□ -1.14
CCDC7-209ENST00000539197 ATP2C1P98194 919 aaPredicted RBP7.95□□□□□ -1.14
CCDC7-209ENST00000539197 IRF9Q00978 393 aa7.95□□□□□ -1.14
CCDC7-209ENST00000539197 RIN1Q13671 783 aa7.95□□□□□ -1.14
CCDC7-209ENST00000539197 MMRN2Q9H8L6 949 aa7.95□□□□□ -1.14
CCDC7-209ENST00000539197 VWA7Q9Y334 891 aa7.95□□□□□ -1.14
CCDC7-209ENST00000539197 CTDP1Q9Y5B0 961 aaPredicted RBP7.95□□□□□ -1.14
CCDC7-209ENST00000539197 MAFO75444 373 aaPredicted RBP7.94□□□□□ -1.14
CCDC7-209ENST00000539197 KRT37O76014 449 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 ADH4P08319 380 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 INHBEP58166 350 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 ANTXR2P58335 489 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 SMN1Q16637 294 aaKnown RBP7.94□□□□□ -1.14
CCDC7-209ENST00000539197 LRP10Q7Z4F1 713 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 C2orf69Q8N8R5 385 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 ZNF483Q8TF39 744 aaPredicted RBP7.94□□□□□ -1.14
CCDC7-209ENST00000539197 LPPQ93052 612 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 MPHOSPH9Q99550 1183 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 HIRIP3Q9BW71 556 aaPredicted RBP7.94□□□□□ -1.14
CCDC7-209ENST00000539197 TRIM39Q9HCM9 518 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 SH3BP1Q9Y3L3 701 aa7.94□□□□□ -1.14
CCDC7-209ENST00000539197 NPTXRO95502 500 aa7.93□□□□□ -1.14
CCDC7-209ENST00000539197 RGS3P49796 1198 aa7.93□□□□□ -1.14
CCDC7-209ENST00000539197 INHBCP55103 352 aa7.93□□□□□ -1.14
CCDC7-209ENST00000539197 ALDH6A1Q02252 535 aaKnown RBP7.93□□□□□ -1.14
CCDC7-209ENST00000539197 RABGGTAQ92696 567 aa7.93□□□□□ -1.14
CCDC7-209ENST00000539197 SRPK1Q96SB4 655 aaKnown RBP7.93□□□□□ -1.14
CCDC7-209ENST00000539197 PARPBPQ9NWS1 579 aa7.93□□□□□ -1.14
CCDC7-209ENST00000539197 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 DVL2O14641 736 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 MAKP20794 623 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 SESN2P58004 480 aaPredicted RBP7.92□□□□□ -1.14
CCDC7-209ENST00000539197 RBL2Q08999 1139 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 CRHR2Q13324 411 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 KLHDC10Q6PID8 442 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 TMPRSS6Q8IU80 811 aa7.92□□□□□ -1.14
CCDC7-209ENST00000539197 A0A087X1B8 175 aa7.91□□□□□ -1.14
CCDC7-209ENST00000539197 A0A1W2PRX2 142 aa7.91□□□□□ -1.14
CCDC7-209ENST00000539197 H2AFYO75367 372 aaKnown RBP7.91□□□□□ -1.14
CCDC7-209ENST00000539197 RRP1BQ14684 758 aaKnown RBP7.91□□□□□ -1.14
CCDC7-209ENST00000539197 JMYQ8N9B5 988 aa7.91□□□□□ -1.14
CCDC7-209ENST00000539197 LARP4BQ92615 738 aaKnown RBP7.91□□□□□ -1.14
CCDC7-209ENST00000539197 RPL10LQ96L21 214 aaKnown RBP7.91□□□□□ -1.14
CCDC7-209ENST00000539197 FOXB1Q99853 325 aa7.91□□□□□ -1.14
CCDC7-209ENST00000539197 SLC2A4RGQ9NR83 387 aa7.91□□□□□ -1.14
CCDC7-209ENST00000539197 CCDC163A0A0D9SF12 145 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 C2orf78A6NCI8 922 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 ADCY7P51828 1080 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 SLC6A3Q01959 620 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 Q6ZRM9 215 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 ZNF627Q7L945 461 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 ANKRD35Q8N283 1001 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms