RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 C22orf31O95567 290 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 RAG1P15918 1043 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 PLCG1P19174 1290 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 THPOP40225 353 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 RARRES1P49788 294 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 MLLT1Q03111 559 aaPredicted RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 GRB10Q13322 594 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 EMC2Q15006 297 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 TARBP2Q15633 366 aaKnown RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 ECM1Q16610 540 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 MARCH8Q5T0T0 291 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 AXDND1Q5T1B0 1012 aaPredicted RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 RESP18Q5W5W9 173 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 EFCAB12Q6NXP0 572 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 USP49Q70CQ1 688 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 PDILTQ8N807 584 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 MTRQ99707 1265 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
NUP50-216ENST00000486184 STK17AQ9UEE5 414 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 AKT3Q9Y243 479 aa12.68□□□□□ -0.38
NUP50-216ENST00000486184 SIP14410 1827 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 SMIM35A0A1B0GVV1 85 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 GOLGA6L22H0YM25 854 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 CAND2O75155 1236 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 MAFO75444 373 aaPredicted RBP12.67□□□□□ -0.38
NUP50-216ENST00000486184 RGS19P49795 217 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 ADAM17P78536 824 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 HIC1Q14526 733 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 DHX8Q14562 1220 aaKnown RBP12.67□□□□□ -0.38
NUP50-216ENST00000486184 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 LRRC71Q8N4P6 559 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 MCPH1Q8NEM0 835 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 DNAJB3Q8WWF6 145 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 MRPS27Q92552 414 aaKnown RBP12.67□□□□□ -0.38
NUP50-216ENST00000486184 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
NUP50-216ENST00000486184 ZBTB10Q96DT7 871 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 SCLT1Q96NL6 688 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 PANK2Q9BZ23 570 aa12.67□□□□□ -0.38
NUP50-216ENST00000486184 SCN5AQ14524 2016 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 A0A1W2PQ27 194 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 A0A1W2PQ64 194 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 A0A1W2PQD8 194 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 KRT18P05783 430 aaKnown RBP12.66□□□□□ -0.38
NUP50-216ENST00000486184 PLA2G4BP0C869 781 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 CMA1P23946 247 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 CLCN3P51790 818 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 IER5Q5VY09 327 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 POTEHQ6S545 545 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 NME8Q8N427 588 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 IQUBQ8NA54 791 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 RAD54LQ92698 747 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 DHX58Q96C10 678 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 LBHD1Q9BQE6 289 aaPredicted RBP12.66□□□□□ -0.38
NUP50-216ENST00000486184 NOC4LQ9BVI4 516 aaKnown RBP12.66□□□□□ -0.38
NUP50-216ENST00000486184 DHX33Q9H6R0 707 aaKnown RBP12.66□□□□□ -0.38
NUP50-216ENST00000486184 TBX21Q9UL17 535 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 KCNH3Q9ULD8 1083 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
NUP50-216ENST00000486184 BRCA2P51587 3418 aa12.66□□□□□ -0.38
NUP50-216ENST00000486184 A0A1B0GVL5 298 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 KIAA0355O15063 1070 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 POLR2DO15514 142 aaKnown RBP12.65□□□□□ -0.38
NUP50-216ENST00000486184 TIMP1P01033 207 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 CTSHP09668 335 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 CKBP12277 381 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 SELPP16109 830 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 PFKFB1P16118 471 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 SYN1P17600 705 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.38
NUP50-216ENST00000486184 FAM102BQ5T8I3 360 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 SV2BQ7L1I2 683 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 KCNK18Q7Z418 384 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 SH3RF1Q7Z6J0 888 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 GPBP1Q86WP2 473 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 CEP57L1Q8IYX8 460 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 TMEM199Q8N511 208 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 SYT2Q8N9I0 419 aaPredicted RBP12.65□□□□□ -0.38
NUP50-216ENST00000486184 PSPC1Q8WXF1 523 aaKnown RBP12.65□□□□□ -0.38
NUP50-216ENST00000486184 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 DHX38Q92620 1227 aaKnown RBP12.65□□□□□ -0.38
NUP50-216ENST00000486184 CCDC34Q96HJ3 373 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 CTAGE1Q96RT6 745 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 CUEDC2Q9H467 287 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 SUCLA2Q9P2R7 463 aaPredicted RBP12.65□□□□□ -0.38
NUP50-216ENST00000486184 GINS2Q9Y248 185 aa12.65□□□□□ -0.38
NUP50-216ENST00000486184 IGKV6-21A0A0C4DH24 114 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms