RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MAP3K13O43283 966 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 CTCFP49711 727 aaPredicted RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 NME8Q8N427 588 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 ZNF507Q8TCN5 953 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 NELFBQ8WX92 580 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 EPAS1Q99814 870 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 C1orf112Q9NSG2 853 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 MID2Q9UJV3 735 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 KCNJ14Q9UNX9 436 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 COPG1Q9Y678 874 aaKnown RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 DCDC2CA8MYV0 355 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 SERPINI2O75830 405 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 HSPA9P38646 679 aaKnown RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 BLVRAP53004 296 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 APOA5Q6Q788 366 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 TRMT10CQ7L0Y3 403 aaKnown RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 PIP4K2CQ8TBX8 421 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 TSC22D3Q99576 134 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 TTYH3Q9C0H2 523 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 MYH7P12883 1935 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 B4E1Z4 1266 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 POC1B-GALNT4F8VUJ3 575 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 H7C0C1 242 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 ATP5OP48047 213 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 GRAMD4Q6IC98 578 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 PDXDC1Q6P996 788 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 OTUD6AQ7L8S5 288 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 SERPINI1Q99574 410 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 TRPC5Q9UL62 973 aaPredicted RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 LGALS16A8MUM7 142 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 ORC4O43929 436 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 COQ9O75208 318 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 PPP2R2AP63151 447 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 NR5A1Q13285 461 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 NLRX1Q86UT6 975 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 CPXCR1Q8N123 301 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 PRCCQ92733 491 aaPredicted RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 GLG1Q92896 1179 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 TRIM55Q9BYV6 548 aa12.35□□□□□ -0.43
U2AF1-209ENST00000475639 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
U2AF1-209ENST00000475639 A0A1W2PQC6 194 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 MMP1P03956 469 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ADCY7P51828 1080 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 NEK2P51955 445 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ZNF844Q08AG5 666 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 PRPSAP1Q14558 356 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 RINT1Q6NUQ1 792 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ERICH1Q86X53 443 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 LZTS2Q9BRK4 669 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 OSBPL1AQ9BXW6 950 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 BLZF1Q9H2G9 400 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TBC1D7Q9P0N9 293 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TLK1Q9UKI8 766 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 DPPA5A6NC42 116 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ZBED4O75132 1171 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 PLEKP08567 350 aaPredicted RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 HSD17B3P37058 310 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TAF11Q15544 211 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TMEM259Q4ZIN3 620 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 CABP7Q86V35 215 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 GPIHBP1Q8IV16 184 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ZBTB8OSQ8IWT0 167 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ZNF513Q8N8E2 541 aaPredicted RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 SPZ1Q9BXG8 430 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 H0YCG3 227 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 STAM2O75886 525 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 GFAPP14136 432 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 KLK7P49862 253 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 KCNJ2P63252 427 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 CALCRLQ16602 461 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ARHGEF18Q6ZSZ5 1173 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ST13P4Q8IZP2 240 aaPredicted RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 B4GALNT2Q8NHY0 566 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TLR10Q9BXR5 811 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 PIDD1Q9HB75 910 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 WARS2Q9UGM6 360 aaKnown RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 A0A1B0GVG6 124 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 SRGAP2BP0DMP2 458 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 ZFXP17010 805 aaPredicted RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 GCLCP48506 637 aaPredicted RBP12.34□□□□□ -0.43
U2AF1-209ENST00000475639 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
U2AF1-209ENST00000475639 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 IRS4O14654 1257 aaPredicted RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 MAP3K7O43318 606 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 KRT10P13645 584 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 ART3Q13508 389 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 LRIG3Q6UXM1 1119 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms