RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 USP38Q8NB14 1042 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PIGOQ8TEQ8 1089 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PPP1R13LQ8WUF5 828 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 TRAPPC12Q8WVT3 735 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 DNAJB3Q8WWF6 145 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PSPC1Q8WXF1 523 aaKnown RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 IFT74Q96LB3 600 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 NOC4LQ9BVI4 516 aaKnown RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 TIPINQ9BVW5 301 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 INO80BQ9C086 356 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 FTOQ9C0B1 505 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 LRRC27Q9C0I9 530 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 CSRNP2Q9H175 543 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 BMP2KQ9NSY1 1161 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 KCND2Q9NZV8 630 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 FBXO2Q9UK22 296 aaPredicted RBP7.1□□□□□ -1.27
SF3B1-206ENST00000462613 RCOR1Q9UKL0 485 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 GINS2Q9Y248 185 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
SF3B1-206ENST00000462613 PP2D1A8MPX8 630 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 USO1O60763 962 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 EFCAB14O75071 495 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 EYA4O95677 639 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 CTSHP09668 335 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 IQCF3P0C7M6 154 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 SPATA31C1P0DKV0 1188 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 CDC25AP30304 524 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 CYP2C18P33260 490 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 STAT6P42226 847 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 CLCN3P51790 818 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 CCL23P55773 120 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 NPEPPSP55786 919 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 MRPS6P82932 125 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 MDM2Q00987 491 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 AMPD3Q01432 767 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 NCBP1Q09161 790 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 TARBP2Q15633 366 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 HYIQ5T013 277 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 PRPF38BQ5VTL8 546 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 ADALQ6DHV7 355 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 PADI6Q6TGC4 694 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 SH3RF1Q7Z6J0 888 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 LRRC71Q8N4P6 559 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 IQUBQ8NA54 791 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 NLRP7Q8WX94 980 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 SYMPKQ92797 1274 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 KIFAP3Q92845 792 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 APBB2Q92870 758 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 BADQ92934 168 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 DRC1Q96MC2 740 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 GBP4Q96PP9 640 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 GCOM2Q9BZD3 368 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 UBE2OQ9C0C9 1292 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 BHMT2Q9H2M3 363 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 CUEDC2Q9H467 287 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 DHX33Q9H6R0 707 aaKnown RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 MAGEF1Q9HAY2 307 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 RNF216Q9NWF9 866 aaPredicted RBP7.09□□□□□ -1.27
SF3B1-206ENST00000462613 ZDHHC9Q9Y397 364 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 TRPV2Q9Y5S1 764 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 SQORQ9Y6N5 450 aa7.09□□□□□ -1.27
SF3B1-206ENST00000462613 PHLPP2Q6ZVD8 1323 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 TMEM150BA6NC51 233 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 TRIM43BA6NCK2 446 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 E9PMD0 336 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 H0YCG3 227 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 H0YGN5 161 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 GPR182O15218 404 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 TBCAO75347 108 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 PLA2G4BP0C869 781 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 PLCG1P19174 1290 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SFPQP23246 707 aaKnown RBP eCLIP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 DDIT3P35638 169 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 PHKA2P46019 1235 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 NLRP11P59045 1033 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 PAK2Q13177 524 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 DHX8Q14562 1220 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 KARSQ15046 597 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 IL17AQ16552 155 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SPECC1Q5M775 1068 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 MARCH8Q5T0T0 291 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 ZNF618Q5T7W0 954 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 FAM102BQ5T8I3 360 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SV2BQ7L1I2 683 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 DEFB128Q7Z7B8 93 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 ZNF410Q86VK4 478 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 RHPN2Q8IUC4 686 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 ZBTB8OSQ8IWT0 167 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 CEP57L1Q8IYX8 460 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SYT2Q8N9I0 419 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 LEO1Q8WVC0 666 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SEPT8Q92599 483 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 LARP4BQ92615 738 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 TRIM43Q96BQ3 446 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 EPSTI1Q96J88 318 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 PLIN2Q99541 437 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SH2D3AQ9BRG2 576 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 MMTAG2Q9BU76 263 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms