RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 EFCAB12Q6NXP0 572 aa28.75■■■□□ 2.19
SMDT1-202ENST00000422252 LINC01465Q8N7H1 131 aa28.75■■■□□ 2.19
SMDT1-202ENST00000422252 WASF1Q92558 559 aa28.75■■■□□ 2.19
SMDT1-202ENST00000422252 MAP7D2Q96T17 732 aa28.75■■■□□ 2.19
SMDT1-202ENST00000422252 ORC3Q9UBD5 711 aaPredicted RBP28.75■■■□□ 2.19
SMDT1-202ENST00000422252 MGEA5O60502 916 aa28.74■■■□□ 2.19
SMDT1-202ENST00000422252 SARSP49591 514 aaKnown RBP28.74■■■□□ 2.19
SMDT1-202ENST00000422252 CMTR2Q8IYT2 770 aaKnown RBP28.74■■■□□ 2.19
SMDT1-202ENST00000422252 C11orf84Q9BUA3 381 aaPredicted RBP28.74■■■□□ 2.19
SMDT1-202ENST00000422252 GJB4Q9NTQ9 266 aa28.74■■■□□ 2.19
SMDT1-202ENST00000422252 LRFN2Q9ULH4 789 aa28.74■■■□□ 2.19
SMDT1-202ENST00000422252 AKT3Q9Y243 479 aa28.74■■■□□ 2.19
SMDT1-202ENST00000422252 SLC37A4O43826 429 aa28.73■■■□□ 2.19
SMDT1-202ENST00000422252 ME3Q16798 604 aa28.73■■■□□ 2.19
SMDT1-202ENST00000422252 NEK8Q86SG6 692 aa28.73■■■□□ 2.19
SMDT1-202ENST00000422252 LRRC71Q8N4P6 559 aa28.73■■■□□ 2.19
SMDT1-202ENST00000422252 NECAB1Q8N987 351 aa28.73■■■□□ 2.19
SMDT1-202ENST00000422252 OXER1Q8TDS5 423 aa28.73■■■□□ 2.19
SMDT1-202ENST00000422252 DENND3A2RUS2 1198 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 PPP4R3AQ6IN85 833 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 FAM228AQ86W67 206 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 ZNF710Q8N1W2 664 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 BANK1Q8NDB2 785 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 GTF3C6Q969F1 213 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 ADAM2Q99965 735 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 PLVAPQ9BX97 442 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 UBE2ZQ9H832 354 aaPredicted RBP28.72■■■□□ 2.19
SMDT1-202ENST00000422252 RGS18Q9NS28 235 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 C1orf112Q9NSG2 853 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 PCDHB7Q9Y5E2 793 aa28.72■■■□□ 2.19
SMDT1-202ENST00000422252 MRPL42Q9Y6G3 142 aaKnown RBP28.72■■■□□ 2.19
SMDT1-202ENST00000422252 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.71■■■□□ 2.19
SMDT1-202ENST00000422252 LARGE1O95461 756 aa28.71■■■□□ 2.19
SMDT1-202ENST00000422252 GCFC2P16383 781 aaKnown RBP28.71■■■□□ 2.19
SMDT1-202ENST00000422252 NEK4P51957 841 aa28.71■■■□□ 2.19
SMDT1-202ENST00000422252 NLRP11P59045 1033 aaKnown RBP28.71■■■□□ 2.19
SMDT1-202ENST00000422252 TBC1D8BQ0IIM8 1120 aa28.71■■■□□ 2.19
SMDT1-202ENST00000422252 PIK3AP1Q6ZUJ8 805 aa28.71■■■□□ 2.19
SMDT1-202ENST00000422252 LMAN2LQ9H0V9 348 aa28.71■■■□□ 2.19
SMDT1-202ENST00000422252 RNF216Q9NWF9 866 aaPredicted RBP28.71■■■□□ 2.19
SMDT1-202ENST00000422252 SEPT9Q9UHD8 586 aaPredicted RBP28.71■■■□□ 2.19
SMDT1-202ENST00000422252 TCF20Q9UGU0 1960 aaKnown RBP28.71■■■□□ 2.19
SMDT1-202ENST00000422252 MUC3AQ02505 3323 aa28.71■■■□□ 2.19
SMDT1-202ENST00000422252 FDPSP14324 419 aaKnown RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 IBSPP21815 317 aaPredicted RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 TARBP2Q15633 366 aaKnown RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 PAN2Q504Q3 1202 aaKnown RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 XKR3Q5GH77 459 aa28.7■■■□□ 2.18
SMDT1-202ENST00000422252 SLC24A5Q71RS6 500 aa28.7■■■□□ 2.18
SMDT1-202ENST00000422252 FAM20AQ96MK3 541 aa28.7■■■□□ 2.18
SMDT1-202ENST00000422252 NECAB3Q96P71 396 aaPredicted RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 NAP1L4Q99733 375 aaKnown RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 NIFKQ9BYG3 293 aaKnown RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 ADAMTS10Q9H324 1103 aa28.7■■■□□ 2.18
SMDT1-202ENST00000422252 NSUN3Q9H649 340 aaKnown RBP28.7■■■□□ 2.18
SMDT1-202ENST00000422252 KCNMB3Q9NPA1 279 aa28.7■■■□□ 2.18
SMDT1-202ENST00000422252 CCNT1O60563 726 aaKnown RBP28.69■■■□□ 2.18
SMDT1-202ENST00000422252 SEC24BO95487 1268 aa28.69■■■□□ 2.18
SMDT1-202ENST00000422252 GATMP50440 423 aa28.69■■■□□ 2.18
SMDT1-202ENST00000422252 C9IYK1 514 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 GRM6O15303 877 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 STBD1O95210 358 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 PPP2R5CQ13362 524 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 MTERF2Q49AM1 385 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 TCEAL5Q5H9L2 206 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 BRMS1Q9HCU9 246 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 VAV3Q9UKW4 847 aa28.68■■■□□ 2.18
SMDT1-202ENST00000422252 EIF4BP23588 611 aaKnown RBP28.67■■■□□ 2.18
SMDT1-202ENST00000422252 KRT2P35908 639 aa28.67■■■□□ 2.18
SMDT1-202ENST00000422252 GPC3P51654 580 aa28.67■■■□□ 2.18
SMDT1-202ENST00000422252 EARS2Q5JPH6 523 aaKnown RBP28.67■■■□□ 2.18
SMDT1-202ENST00000422252 NSUN7Q8NE18 718 aaKnown RBP28.67■■■□□ 2.18
SMDT1-202ENST00000422252 P2RX5Q93086 422 aa28.67■■■□□ 2.18
SMDT1-202ENST00000422252 TMEM150BA6NC51 233 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 EML1O00423 815 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 TBX3O15119 743 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 KCNA5P22460 613 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 PSMC5P62195 406 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 DSC3Q14574 896 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 NAALADL2Q58DX5 795 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 ZNF668Q96K58 619 aaPredicted RBP28.66■■■□□ 2.18
SMDT1-202ENST00000422252 CEP89Q96ST8 783 aa28.66■■■□□ 2.18
SMDT1-202ENST00000422252 DDX11L8A8MPP1 907 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 FAM189BP81408 668 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 NR5A1Q13285 461 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 LEXMQ3ZCV2 418 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 HAS1Q92839 578 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 SCLT1Q96NL6 688 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 SH2D3AQ9BRG2 576 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 ALG13Q9NP73 1137 aaKnown RBP28.65■■■□□ 2.18
SMDT1-202ENST00000422252 PLAGL2Q9UPG8 496 aa28.65■■■□□ 2.18
SMDT1-202ENST00000422252 IGKV6-21A0A0C4DH24 114 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 MMP1P03956 469 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 FAM102BQ5T8I3 360 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 NLRP7Q8WX94 980 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 TNFRSF25Q93038 417 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 ELAC1Q9H777 363 aaKnown RBP28.64■■■□□ 2.18
SMDT1-202ENST00000422252 ATP6V0A4Q9HBG4 840 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 TMEM161AQ9NX61 479 aa28.64■■■□□ 2.18
SMDT1-202ENST00000422252 BRWD1Q9NSI6 2320 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms