RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 KCNA3P22001 575 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 CACNA2D1P54289 1103 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 PTENP60484 403 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 OCRLQ01968 901 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 KLRC3Q07444 240 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 SLC29A2Q14542 456 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 VSIG1Q86XK7 387 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 LRRC8CQ8TDW0 803 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 NCSTNQ92542 709 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 RNF25Q96BH1 459 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 ZNF496Q96IT1 587 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 DDX23Q9BUQ8 820 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 MIS12Q9H081 205 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 ZCWPW1Q9H0M4 648 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 NLRC4Q9NPP4 1024 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 TCP11L1Q9NUJ3 509 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 USP20Q9Y2K6 914 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 A0A087X0T9 212 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 A0A0A6YYK5 440 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 SMIM23A6NLE4 172 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 ECE2O60344 883 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 TLR2O60603 784 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 DDAH1O94760 285 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 FAM228BP0C875 321 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 ZBTB48P10074 688 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 NPEPPSP55786 919 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 RCN2Q14257 317 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 SEC23AQ15436 765 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 SPDYAQ5MJ70 313 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 BICDL1Q6ZP65 573 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 PROM2Q8N271 834 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 AZIN2Q96A70 460 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 IWS1Q96ST2 819 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 CELF4Q9BZC1 486 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 NMRK1Q9NWW6 199 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 SEC63Q9UGP8 760 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 COMMD3-BMI1R4GMX3 469 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 TJP1Q07157 1748 aa6.31□□□□□ -1.4
R3HDM1-202ENST00000409478 MBD4O95243 580 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 FCER1AP12319 257 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 ITGA4P13612 1032 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 AUHQ13825 339 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 MTFR1Q15390 333 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CCDC6Q16204 474 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 KIAA1755Q5JYT7 1200 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CHADLQ6NUI6 762 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SLFN11Q7Z7L1 901 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 MYLK4Q86YV6 388 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SYCP3Q8IZU3 236 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 GUF1Q8N442 669 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PPFIBP2Q8ND30 876 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 STKLD1Q8NE28 680 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TPCN2Q8NHX9 752 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RBM17Q96I25 401 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RMDN2Q96LZ7 410 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 MAGEB18Q96M61 343 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PPP1R12CQ9BZL4 782 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RIC8AQ9NPQ8 531 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 ADAMTS1Q9UHI8 967 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RGPD8O14715 1765 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 GSG1L2A8MUP6 293 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CETN3O15182 167 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 DCTN3O75935 186 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TJP3O95049 919 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SCG2P13521 617 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 POLR2FP61218 127 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 KCNMA1Q12791 1236 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RAPGEF1Q13905 1077 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 IFIT1BQ5T764 474 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 FOXB2Q5VYV0 432 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 ARHGEF18Q6ZSZ5 1173 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 KIAA0895Q8NCT3 520 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SLC17A8Q8NDX2 589 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PPP1R14BQ96C90 147 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 NR1H4Q96RI1 486 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TGS1Q96RS0 853 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TRIM51Q9BSJ1 452 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 LSM14BQ9BX40 385 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TRIM31Q9BZY9 425 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TAOK3Q9H2K8 898 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CCDC87Q9NVE4 849 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 STXBP5LQ9Y2K9 1186 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RGPD2P0DJD1 1756 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 TMEM120BA0PK00 339 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 ATP9AO75110 1047 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PLEKHA8P1O95397 391 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CCDC166P0CW27 439 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 PLCG1P19174 1290 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 SERPINB4P48594 390 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 POLGP54098 1239 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 CABP7Q86V35 215 aa6.3□□□□□ -1.4
R3HDM1-202ENST00000409478 EXOC3L1Q86VI1 746 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms