RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ZC3H4Q9UPT8 1303 aaKnown RBP25.98■■□□□ 1.75
PABPN1-202ENST00000397276 GAP43P17677 238 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 MAGEA9P43362 315 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 CXCL9Q07325 125 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 FAM160B2Q86V87 743 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 RNF10Q8N5U6 811 aaKnown RBP25.98■■□□□ 1.75
PABPN1-202ENST00000397276 WDR11Q9BZH6 1224 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 EHMT1Q9H9B1 1298 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 EFCC1Q9HA90 598 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 MED4Q9NPJ6 270 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 LUC7LQ9NQ29 371 aaKnown RBP25.98■■□□□ 1.75
PABPN1-202ENST00000397276 ZNRF3Q9ULT6 936 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 ZMYM2Q9UBW7 1377 aa25.98■■□□□ 1.75
PABPN1-202ENST00000397276 ITGB5P18084 799 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 NAB2Q15742 525 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 GBP6Q6ZN66 633 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 AFAP1L1Q8TED9 768 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 NACC1Q96RE7 527 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 TEKT3Q9BXF9 490 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 TARSL2A2RTX5 802 aaKnown RBP25.97■■□□□ 1.75
PABPN1-202ENST00000397276 PRLRP16471 622 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 GRIPAP1Q4V328 841 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 FAM186BQ8IYM0 893 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 IL31RAQ8NI17 732 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 HOOK2Q96ED9 719 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 GOLPH3Q9H4A6 298 aa25.97■■□□□ 1.75
PABPN1-202ENST00000397276 METTL14Q9HCE5 456 aaKnown RBP25.97■■□□□ 1.75
PABPN1-202ENST00000397276 GGCXP38435 758 aa25.96■■□□□ 1.75
PABPN1-202ENST00000397276 PAFAH1B1P43034 410 aa25.96■■□□□ 1.75
PABPN1-202ENST00000397276 ASNSP08243 561 aa25.96■■□□□ 1.75
PABPN1-202ENST00000397276 CCNI2Q6ZMN8 369 aaPredicted RBP25.96■■□□□ 1.75
PABPN1-202ENST00000397276 ZNF720Q7Z2F6 126 aa25.96■■□□□ 1.75
PABPN1-202ENST00000397276 PLCB1Q9NQ66 1216 aa25.96■■□□□ 1.75
PABPN1-202ENST00000397276 SAMM50Q9Y512 469 aa25.96■■□□□ 1.75
PABPN1-202ENST00000397276 ALAS1P13196 640 aa25.95■■□□□ 1.75
PABPN1-202ENST00000397276 MCM3P25205 808 aa25.95■■□□□ 1.75
PABPN1-202ENST00000397276 CCDC70Q6NSX1 233 aa25.95■■□□□ 1.75
PABPN1-202ENST00000397276 EGFRP00533 1210 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 RASA3Q14644 834 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 MAP9Q49MG5 647 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
PABPN1-202ENST00000397276 FIZ1Q96SL8 496 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 MXRA8Q9BRK3 442 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 KCNH7Q9NS40 1196 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 RBM12Q9NTZ6 932 aaKnown RBP25.95■■□□□ 1.74
PABPN1-202ENST00000397276 ARHGEF35A5YM69 484 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 TBC1D12O60347 775 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 PSMC2P35998 433 aaKnown RBP25.95■■□□□ 1.74
PABPN1-202ENST00000397276 CORO7P57737 925 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 TTC31Q49AM3 519 aaPredicted RBP25.95■■□□□ 1.74
PABPN1-202ENST00000397276 RAVER2Q9HCJ3 691 aaKnown RBP25.95■■□□□ 1.74
PABPN1-202ENST00000397276 SIX2Q9NPC8 291 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 BCS1LQ9Y276 419 aa25.95■■□□□ 1.74
PABPN1-202ENST00000397276 ZNF536O15090 1300 aa25.94■■□□□ 1.74
PABPN1-202ENST00000397276 SLC16A3O15427 465 aaKnown RBP25.94■■□□□ 1.74
PABPN1-202ENST00000397276 TRIM49P0CI25 452 aa25.94■■□□□ 1.74
PABPN1-202ENST00000397276 TRIM49CP0CI26 452 aa25.94■■□□□ 1.74
PABPN1-202ENST00000397276 MMGT1Q8N4V1 131 aa25.94■■□□□ 1.74
PABPN1-202ENST00000397276 ACBD3Q9H3P7 528 aa25.94■■□□□ 1.74
PABPN1-202ENST00000397276 HIP1RO75146 1068 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 PTGER2P43116 358 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 AARSP49588 968 aaKnown RBP eCLIP25.93■■□□□ 1.748e-7■■□□□ 12.8
PABPN1-202ENST00000397276 FAM83AQ86UY5 434 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 GOLGA6L1Q8N7Z2 621 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 AGPSO00116 658 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 EIF3DO15371 548 aaKnown RBP eCLIP25.93■■□□□ 1.74
PABPN1-202ENST00000397276 GFPT2O94808 682 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 MIER3Q7Z3K6 550 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 DEFB132Q7Z7B7 95 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 SYCP3Q8IZU3 236 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 SELENOOQ9BVL4 669 aa25.93■■□□□ 1.74
PABPN1-202ENST00000397276 ICAM1P05362 532 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 SETQ01105 290 aaPredicted RBP25.92■■□□□ 1.74
PABPN1-202ENST00000397276 TBC1D10BQ4KMP7 808 aaPredicted RBP25.92■■□□□ 1.74
PABPN1-202ENST00000397276 ALKBH5Q6P6C2 394 aaKnown RBP25.92■■□□□ 1.74
PABPN1-202ENST00000397276 HS2ST1Q7LGA3 356 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 BORCS6Q96GS4 357 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 MYOZ2Q9NPC6 264 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 FRMPD4Q14CM0 1322 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 PPFIA4O75335 1185 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 AGBL3Q8NEM8 1001 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 PGAP2Q9UHJ9 254 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 NAGPAQ9UK23 515 aa25.92■■□□□ 1.74
PABPN1-202ENST00000397276 GRID2IPA4D2P6 1211 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 PPP1R12BO60237 982 aaPredicted RBP25.91■■□□□ 1.74
PABPN1-202ENST00000397276 AGPAT3Q9NRZ7 376 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 TMEM150BA6NC51 233 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 TISP43B9A030 160 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 CFAP221Q4G0U5 840 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 CBWD6Q4V339 395 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 CBWD3Q5JTY5 395 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 CBWD5Q5RIA9 395 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 FKBP1CQ5VVH2 108 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 PRPF38AQ8NAV1 312 aaKnown RBP25.91■■□□□ 1.74
PABPN1-202ENST00000397276 PCIF1Q9H4Z3 704 aa25.91■■□□□ 1.74
PABPN1-202ENST00000397276 TNS1Q9HBL0 1735 aaKnown RBP25.9■■□□□ 1.74
PABPN1-202ENST00000397276 PLA2G6O60733 806 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 EIF2AK2P19525 551 aaKnown RBP25.9■■□□□ 1.74
PABPN1-202ENST00000397276 DAW1Q8N136 415 aa25.9■■□□□ 1.74
PABPN1-202ENST00000397276 FRMD4BQ9Y2L6 1034 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms