RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
SIPA1-201ENST00000394224 RBAK-RBAKDNI3L0D1 243 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 RGS16O15492 202 aaPredicted RBP18.18■□□□□ 0.5
SIPA1-201ENST00000394224 NR3C1P04150 777 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 TNFAIP3P21580 790 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 DR1Q01658 176 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 MYO1EQ12965 1108 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 IRF2BP2Q7Z5L9 587 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 MSL3Q8N5Y2 521 aaKnown RBP18.18■□□□□ 0.5
SIPA1-201ENST00000394224 TRIM33Q9UPN9 1127 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 TCRBV7S2A1N4TA0A589 114 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 FAM13AO94988 1023 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 CCDC172P0C7W6 258 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
SIPA1-201ENST00000394224 GALNT17Q6IS24 598 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 CCDC26Q8TAB7 109 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 ISCUQ9H1K1 167 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 CTNNAL1Q9UBT7 734 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 DNAJC12Q9UKB3 198 aa18.18■□□□□ 0.5
SIPA1-201ENST00000394224 EPB41P11171 864 aaKnown RBP18.17■□□□□ 0.5
SIPA1-201ENST00000394224 GSTO1P78417 241 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 SKOR1P84550 965 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 CDK17Q00537 523 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 SP4Q02446 784 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 DAAM1Q9Y4D1 1078 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 USP11P51784 963 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 MAP2K1Q02750 393 aaPredicted RBP18.17■□□□□ 0.5
SIPA1-201ENST00000394224 SNCBQ16143 134 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 FAM47EQ6ZV65 393 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 LRRC34Q8IZ02 419 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 ARFGAP2Q8N6H7 521 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 PRPF38AQ8NAV1 312 aaKnown RBP18.17■□□□□ 0.5
SIPA1-201ENST00000394224 KAT5Q92993 513 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 DHX36Q9H2U1 1008 aaKnown RBP18.17■□□□□ 0.5
SIPA1-201ENST00000394224 TSKSQ9UJT2 592 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 PRLRP16471 622 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 FNTAP49354 379 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 DENND2CQ68D51 928 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 C1orf54Q8WWF1 131 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 PSMD1Q99460 953 aa18.17■□□□□ 0.5
SIPA1-201ENST00000394224 TPX2Q9ULW0 747 aaKnown RBP18.17■□□□□ 0.5
SIPA1-201ENST00000394224 TMEM150BA6NC51 233 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 NEBLO76041 1014 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 PARP9Q8IXQ6 854 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 SLC30A5Q8TAD4 765 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 INTS9Q9NV88 658 aaKnown RBP18.16■□□□□ 0.5
SIPA1-201ENST00000394224 A8MUI8 341 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 EXOC3O60645 756 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 ECHS1P30084 290 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 SCTRP47872 440 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 RUFY4Q6ZNE9 571 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 ANO3Q9BYT9 981 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 PJA2O43164 708 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 KNOP1Q1ED39 458 aaKnown RBP18.16■□□□□ 0.5
SIPA1-201ENST00000394224 CNPY4Q8N129 248 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 SLC17A8Q8NDX2 589 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 ATG4AQ8WYN0 398 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 ALG3Q92685 438 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 FAM167BQ9BTA0 163 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 HEMGNQ9BXL5 484 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 DBNDD1Q9H9R9 158 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 PCDHGC5Q9Y5F6 944 aa18.16■□□□□ 0.5
SIPA1-201ENST00000394224 GCLMP48507 274 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 GLE1Q53GS7 698 aaKnown RBP18.15■□□□□ 0.5
SIPA1-201ENST00000394224 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 FAM186BQ8IYM0 893 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 DAGLBQ8NCG7 672 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 BANK1Q8NDB2 785 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 GANQ9H2C0 597 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 MAGEF1Q9HAY2 307 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 USP20Q9Y2K6 914 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 SPOPO43791 374 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 CBWD6Q4V339 395 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 CBWD3Q5JTY5 395 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 CBWD5Q5RIA9 395 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 PPP1R18Q6NYC8 613 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 LLGL2Q6P1M3 1020 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 TMC3Q7Z5M5 1100 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 ZSWIM2Q8NEG5 633 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 VCPKMTQ9H867 229 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 UBE2TQ9NPD8 197 aaPredicted RBP18.15■□□□□ 0.5
SIPA1-201ENST00000394224 SERPINB13Q9UIV8 391 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 GGA1Q9UJY5 639 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 TRIM68Q6AZZ1 485 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 NGLY1Q96IV0 654 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
SIPA1-201ENST00000394224 DDX23Q9BUQ8 820 aaKnown RBP18.15■□□□□ 0.5
SIPA1-201ENST00000394224 SUFUQ9UMX1 484 aa18.15■□□□□ 0.5
SIPA1-201ENST00000394224 PNMA6FA0A0J9YX94 578 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 EML1O00423 815 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 FXR2P51116 673 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■■□ 24.4
SIPA1-201ENST00000394224 SEPT2Q15019 361 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 STAMBPL1Q96FJ0 436 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 ABCF3Q9NUQ8 709 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 FAM86B1E9PN63 330 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 FAM86B2P0C5J1 330 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 PAX7P23759 505 aa18.14■□□□□ 0.49
SIPA1-201ENST00000394224 FUKQ8N0W3 1084 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms