RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 SLFN13Q68D06 897 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 TRIM68Q6AZZ1 485 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 PPM1KQ8N3J5 372 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 CCDC127Q96BQ5 260 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 NGLY1Q96IV0 654 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 UBE2TQ9NPD8 197 aaPredicted RBP17.42■□□□□ 0.38
PDZD4-202ENST00000393758 MTMR4Q9NYA4 1195 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 C10orf76Q5T2E6 689 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 KLHL29Q96CT2 875 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 MYH13Q9UKX3 1938 aa17.42■□□□□ 0.38
PDZD4-202ENST00000393758 AKAP3O75969 853 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 LMNB1P20700 586 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 SCTRP47872 440 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 SMTNP53814 917 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 KCNA1Q09470 495 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 AADACL2Q6P093 401 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 TAOK1Q7L7X3 1001 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 SUFUQ9UMX1 484 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 CEP83Q9Y592 693 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 ELF1P32519 619 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 STX2P32856 288 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 SEPT2Q15019 361 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 QRICH1Q2TAL8 776 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 RPAINQ86UA6 219 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 KIF2BQ8N4N8 673 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
PDZD4-202ENST00000393758 SH2D3AQ9BRG2 576 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 PCDHGC5Q9Y5F6 944 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 TNS2Q63HR2 1409 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 ZBTB5O15062 677 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 TRIM37O94972 964 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 GDF11O95390 407 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 KRT5P13647 590 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 SLC8A1P32418 973 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 PSMC2P35998 433 aaKnown RBP17.41■□□□□ 0.38
PDZD4-202ENST00000393758 VSIG1Q86XK7 387 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 FBXO25Q8TCJ0 367 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 MTMR9Q96QG7 549 aa17.41■□□□□ 0.38
PDZD4-202ENST00000393758 CNOT8Q9UFF9 292 aaKnown RBP17.41■□□□□ 0.38
PDZD4-202ENST00000393758 ATMINO43313 823 aaPredicted RBP17.4■□□□□ 0.38
PDZD4-202ENST00000393758 FSBPO95073 299 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
PDZD4-202ENST00000393758 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 CCDC174Q6PII3 467 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 LRIG3Q6UXM1 1119 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 ADAM33Q9BZ11 813 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 YY1AP1Q9H869 796 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 ARHGAP4P98171 946 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 MYL7Q01449 175 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 PPP2R5AQ15172 486 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 LRRC34Q8IZ02 419 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 DNAJC19Q96DA6 116 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 MXD3Q9BW11 206 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 CNOT10Q9H9A5 744 aaKnown RBP17.4■□□□□ 0.38
PDZD4-202ENST00000393758 HOMER3Q9NSC5 361 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 NKIRAS1Q9NYS0 192 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 LMTK3Q96Q04 1460 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 SCP2P22307 547 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
PDZD4-202ENST00000393758 ARHGEF35A5YM69 484 aa17.39■□□□□ 0.38
PDZD4-202ENST00000393758 SHBGP04278 402 aa17.39■□□□□ 0.38
PDZD4-202ENST00000393758 LACTBP83111 547 aaPredicted RBP17.39■□□□□ 0.38
PDZD4-202ENST00000393758 FAM47EQ6ZV65 393 aa17.39■□□□□ 0.38
PDZD4-202ENST00000393758 KCNV2Q8TDN2 545 aa17.39■□□□□ 0.38
PDZD4-202ENST00000393758 SYN2Q92777 582 aaPredicted RBP17.39■□□□□ 0.38
PDZD4-202ENST00000393758 PPP1R9AQ9ULJ8 1098 aa17.39■□□□□ 0.38
PDZD4-202ENST00000393758 USTQ9Y2C2 406 aa17.39■□□□□ 0.38
PDZD4-202ENST00000393758 IFI35P80217 286 aaPredicted RBP17.39■□□□□ 0.37
PDZD4-202ENST00000393758 CATSPER3Q86XQ3 398 aa17.39■□□□□ 0.37
PDZD4-202ENST00000393758 KIAA0825Q8IV33 1275 aa17.39■□□□□ 0.37
PDZD4-202ENST00000393758 ZNF622Q969S3 477 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDZD4-202ENST00000393758 C18orf8Q96DM3 657 aa17.39■□□□□ 0.37
PDZD4-202ENST00000393758 COL1A1P02452 1464 aaPredicted RBP17.39■□□□□ 0.37
PDZD4-202ENST00000393758 BCRP11274 1271 aa17.39■□□□□ 0.37
PDZD4-202ENST00000393758 EPS8L3Q8TE67 593 aaKnown RBP17.39■□□□□ 0.37
PDZD4-202ENST00000393758 TPX2Q9ULW0 747 aaKnown RBP17.39■□□□□ 0.37
PDZD4-202ENST00000393758 EIF3BP55884 814 aaKnown RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 LONRF1Q17RB8 773 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 CYP4F22Q6NT55 531 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 INTS8Q75QN2 995 aaKnown RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 TMC3Q7Z5M5 1100 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 TAB3Q8N5C8 712 aaPredicted RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 C8orf37Q96NL8 207 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 NAP1L4Q99733 375 aaKnown RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 THAP2Q9H0W7 228 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 M0R2N6 131 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 TRAPPC3O43617 180 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 SKAP2O75563 359 aaPredicted RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 FTLP02792 175 aaPredicted RBP17.38■□□□□ 0.37
PDZD4-202ENST00000393758 GPSM2P81274 684 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 ZNF543Q08ER8 600 aa17.38■□□□□ 0.37
PDZD4-202ENST00000393758 ANKRD20A8PQ5CZ79 823 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms