RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GID8Q9NWU2 228 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 GEMIN8Q9NWZ8 242 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ADD3Q9UEY8 706 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ITGB1BP2Q9UKP3 347 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 PPM1KQ8N3J5 372 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 SH3TC2Q8TF17 1288 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 EDC3Q96F86 508 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 APOL6Q9BWW8 343 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ZNF215Q9UL58 517 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 KIAA0825Q8IV33 1275 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 DHTKD1Q96HY7 919 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ZMYND12Q9H0C1 365 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 MAP4P27816 1152 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 PPP4R4Q6NUP7 873 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ZNF197O14709 1029 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 OR52Z1P0C646 297 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 MAGEA9P43362 315 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 POLR2FP61218 127 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 ARHGAP27Q6ZUM4 889 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 TLK2Q86UE8 772 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 FSD1LQ9BXM9 530 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 FANCEQ9HB96 536 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 PTPN22Q9Y2R2 807 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 GTPBP6O43824 516 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 DNAJC24Q6P3W2 148 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 PRUNE1Q86TP1 453 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 SEPT9Q9UHD8 586 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 PPP2R2CQ9Y2T4 447 aa15.72■□□□□ 0.11
CCDC50-201ENST00000392455 MORC2Q9Y6X9 1032 aaPredicted RBP15.72■□□□□ 0.11
CCDC50-201ENST00000392455 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 SLFN12LQ6IEE8 588 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 CCDC188H7C350 402 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PSMC1P62191 440 aaKnown RBP15.71■□□□□ 0.11
CCDC50-201ENST00000392455 BBS7Q8IWZ6 715 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 CCNYQ8ND76 341 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 BTBD6Q96KE9 485 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 DESI2Q9BSY9 194 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 RUBCNLQ9H714 662 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 SLC39A2Q9NP94 309 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.71■□□□□ 0.11
CCDC50-201ENST00000392455 NR1D1P20393 614 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PNMA1Q8ND90 353 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 ASAP2O43150 1006 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 SLC4A1P02730 911 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 SOX6P35712 828 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PSMC2P35998 433 aaKnown RBP15.71■□□□□ 0.11
CCDC50-201ENST00000392455 TRAPPC10P48553 1259 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 C1orf146Q5VVC0 180 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 POTEEQ6S8J3 1075 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 SCFD1Q8WVM8 642 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 CCDC90BQ9GZT6 254 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 BRD8Q9H0E9 1235 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
CCDC50-201ENST00000392455 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.11
CCDC50-201ENST00000392455 ARHGEF12Q9NZN5 1544 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 KLRF2D3W0D1 207 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PDCLQ13371 301 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 BTDP43251 543 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 BTN2A2Q8WVV5 523 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 CCDC127Q96BQ5 260 aa15.71■□□□□ 0.11
CCDC50-201ENST00000392455 CHL1O00533 1208 aa15.71■□□□□ 0.1
CCDC50-201ENST00000392455 CDC27P30260 824 aa15.71■□□□□ 0.1
CCDC50-201ENST00000392455 CAPZA2P47755 286 aa15.71■□□□□ 0.1
CCDC50-201ENST00000392455 POTEAQ6S8J7 498 aa15.71■□□□□ 0.1
CCDC50-201ENST00000392455 SIX6OS1Q8N1H7 587 aa15.71■□□□□ 0.1
CCDC50-201ENST00000392455 GDAP1Q8TB36 358 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 PDE11AQ9HCR9 933 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 H2AFY2Q9P0M6 372 aaPredicted RBP15.7■□□□□ 0.1
CCDC50-201ENST00000392455 LRFN2Q9ULH4 789 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 hCG_1984214I3L0E3 225 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 SYNCRIPO60506 623 aaKnown RBP15.7■□□□□ 0.1
CCDC50-201ENST00000392455 SUPT3HO75486 399 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 DPH5Q9H2P9 285 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 PURAQ00577 322 aaKnown RBP15.7■□□□□ 0.1
CCDC50-201ENST00000392455 ICA1Q05084 483 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 SPATA1Q5VX52 437 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 THAP11Q96EK4 314 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 SIKE1Q9BRV8 207 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 PITPNM3Q9BZ71 974 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 SENP1Q9P0U3 644 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 ZBED1O96006 694 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 IKBIPQ70UQ0 350 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 RTL3Q8N8U3 475 aaKnown RBP15.7■□□□□ 0.1
CCDC50-201ENST00000392455 CMTM5Q96DZ9 223 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 VPS50Q96JG6 964 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 AKT3Q9Y243 479 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 COPEO14579 308 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 ZNF544Q6NX49 715 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 RHOT2Q8IXI1 618 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
CCDC50-201ENST00000392455 ZNF496Q96IT1 587 aaPredicted RBP15.7■□□□□ 0.1
CCDC50-201ENST00000392455 CNPY3Q9BT09 278 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 ARHGEF3Q9NR81 526 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 IARS2Q9NSE4 1012 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms