RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 TSNARE1Q96NA8 513 aa19.22■□□□□ 0.67
UBL3-201ENST00000380680 DDR1Q08345 913 aa19.22■□□□□ 0.67
UBL3-201ENST00000380680 TERF2Q15554 542 aa19.22■□□□□ 0.67
UBL3-201ENST00000380680 TTI2Q6NXR4 508 aa19.22■□□□□ 0.67
UBL3-201ENST00000380680 PPP1R21Q6ZMI0 780 aa19.22■□□□□ 0.67
UBL3-201ENST00000380680 MSTO1Q9BUK6 570 aa19.22■□□□□ 0.67
UBL3-201ENST00000380680 ESYT3A0FGR9 886 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 ZNF185O15231 689 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 VSNL1P62760 191 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 TFDP1Q14186 410 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 HADHQ16836 314 aaKnown RBP19.21■□□□□ 0.67
UBL3-201ENST00000380680 TTC31Q49AM3 519 aaPredicted RBP19.21■□□□□ 0.67
UBL3-201ENST00000380680 CDKAL1Q5VV42 579 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 GRK7Q8WTQ7 553 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 JPH2Q9BR39 696 aaPredicted RBP19.21■□□□□ 0.67
UBL3-201ENST00000380680 DDX4Q9NQI0 724 aaKnown RBP19.21■□□□□ 0.67
UBL3-201ENST00000380680 POLRMTO00411 1230 aaKnown RBP19.21■□□□□ 0.67
UBL3-201ENST00000380680 SGO2Q562F6 1265 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 DPP9Q86TI2 863 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 RHOT2Q8IXI1 618 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 FAM213AQ9BRX8 229 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 AKT3Q9Y243 479 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 GOLGA8SH3BPF8 625 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 STAM2O75886 525 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 RNF8O76064 485 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 SFNP31947 248 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 ZC2HC1CQ53FD0 456 aaPredicted RBP19.21■□□□□ 0.67
UBL3-201ENST00000380680 EMBQ6PCB8 327 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 ADAM21Q9UKJ8 722 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 EMSYQ7Z589 1322 aa19.21■□□□□ 0.67
UBL3-201ENST00000380680 SLC9A1P19634 815 aa19.21■□□□□ 0.66
UBL3-201ENST00000380680 ANKRD7Q92527 254 aa19.21■□□□□ 0.66
UBL3-201ENST00000380680 NLRP4Q96MN2 994 aa19.21■□□□□ 0.66
UBL3-201ENST00000380680 FAM169AQ9Y6X4 670 aa19.21■□□□□ 0.66
UBL3-201ENST00000380680 DAPK3O43293 454 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 RSAD2Q8WXG1 361 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 PPP1R16BQ96T49 567 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
UBL3-201ENST00000380680 BAATQ14032 418 aaPredicted RBP19.2■□□□□ 0.66
UBL3-201ENST00000380680 EDRF1Q3B7T1 1238 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 EXOC4Q96A65 974 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 ERGIC2Q96RQ1 377 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 PCDHA10Q9Y5I2 948 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 ATF2P15336 505 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 UCHL3P15374 230 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 ERVK-24P63145 666 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 SETDB1Q15047 1291 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 PRAMEF18Q5VWM3 479 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 CEP57Q86XR8 500 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 SPATA4Q8NEY3 305 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 FAM163AQ96GL9 167 aaPredicted RBP19.2■□□□□ 0.66
UBL3-201ENST00000380680 AGBL1Q96MI9 1066 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 ATP6V0A4Q9HBG4 840 aa19.2■□□□□ 0.66
UBL3-201ENST00000380680 CNOT7Q9UIV1 285 aaKnown RBP19.2■□□□□ 0.66
UBL3-201ENST00000380680 PPFIA4O75335 1185 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 CYP11B2P19099 503 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 SHMT1P34896 483 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 IREB2P48200 963 aaKnown RBP19.19■□□□□ 0.66
UBL3-201ENST00000380680 BFSP1Q12934 665 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 MICALL2Q8IY33 904 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 THNSL1Q8IYQ7 743 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 SNX12Q9UMY4 172 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 SLC15A2Q16348 729 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 TTC16Q8NEE8 873 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 TRIM11Q96F44 468 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 FAM81BQ96LP2 452 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 HESX1Q9UBX0 185 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 SSU72P8A0A1W2PR75 194 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 CCT5P48643 541 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 CCNA1P78396 465 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 SLC18A3Q16572 532 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 ZNF394Q53GI3 561 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 NT5DC1Q5TFE4 455 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 ANKS1AQ92625 1134 aa19.19■□□□□ 0.66
UBL3-201ENST00000380680 CCDC188H7C350 402 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 MSH4O15457 936 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 RNF34Q969K3 372 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 MORC2Q9Y6X9 1032 aaPredicted RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 WDR46O15213 610 aaKnown RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 DDX47Q9H0S4 455 aaKnown RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 HOMER3Q9NSC5 361 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 MED24O75448 989 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 DPEP1P16444 411 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 BMP6P22004 513 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 YWHABP31946 246 aaKnown RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 CYFIP1Q7L576 1253 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 KSR1Q8IVT5 923 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 WHAMMQ8TF30 809 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 LPAR1Q92633 364 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 L2HGDHQ9H9P8 463 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 TCHHQ07283 1943 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 FTLP02792 175 aaPredicted RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 PLEKP08567 350 aaPredicted RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 HSPA6P17066 643 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 PMS1P54277 932 aaKnown RBP19.18■□□□□ 0.66
UBL3-201ENST00000380680 MXRA7P84157 204 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 NNTQ13423 1086 aa19.18■□□□□ 0.66
UBL3-201ENST00000380680 RPUSD2Q8IZ73 545 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms