RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 MAGOHP61326 146 aaKnown RBP12.6□□□□□ -0.39
COPA-202ENST00000368069 PDXDC2PQ6P474 469 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 RILPQ96NA2 401 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
COPA-202ENST00000368069 A0A1W2PQJ5 194 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 PODXLO00592 558 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 ARL1P40616 181 aaPredicted RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 YARSP54577 528 aaKnown RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 PDXKO00764 312 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 ECE2O60344 883 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 CCND2P30279 289 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 NMT1P30419 496 aaKnown RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 EARS2Q5JPH6 523 aaKnown RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 DAGLBQ8NCG7 672 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 GDAP1Q8TB36 358 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 RNF34Q969K3 372 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 ATP6V1G3Q96LB4 118 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 ERGIC2Q96RQ1 377 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 RBM12Q9NTZ6 932 aaKnown RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 CNOT8Q9UFF9 292 aaKnown RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 IVNS1ABPQ9Y6Y0 642 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
COPA-202ENST00000368069 E2F5Q15329 346 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 FAM160B1Q5W0V3 765 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 MIS18BP1Q6P0N0 1132 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 DNAJC24Q6P3W2 148 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 NCAPG2Q86XI2 1143 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 SLC16A4O15374 487 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 EYA4O95677 639 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 MMEP08473 750 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 DYNLT1P63172 113 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 ARHGEF18Q6ZSZ5 1173 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 HNRNPLLQ8WVV9 542 aaKnown RBP12.59□□□□□ -0.39
COPA-202ENST00000368069 FUT8Q9BYC5 575 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
COPA-202ENST00000368069 H7C0C1 242 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 PLEKP08567 350 aaPredicted RBP12.58□□□□□ -0.4
COPA-202ENST00000368069 SOX5P35711 763 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 ATP5OP48047 213 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 MTMR1Q13613 665 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
COPA-202ENST00000368069 SEPT14Q6ZU15 432 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 RFX6Q8HWS3 928 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 RFFLQ8WZ73 363 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 LXNQ9BS40 222 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 AMACRQ9UHK6 382 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 FBXL5Q9UKA1 691 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 FAM205AQ6ZU69 1335 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 VAMP7P51809 220 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 SH2D3CQ8N5H7 860 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 RUBCNQ92622 972 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 DNAJC7Q99615 494 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 ZNF233A6NK53 670 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 SART1O43290 800 aaKnown RBP12.58□□□□□ -0.4
COPA-202ENST00000368069 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
COPA-202ENST00000368069 CD58P19256 250 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■■□ 21.7
COPA-202ENST00000368069 SLITRK6Q9H5Y7 841 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 CSADQ9Y600 493 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 PSAPP07602 524 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 ASNSP08243 561 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 UCHL3P15374 230 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
COPA-202ENST00000368069 TFAMQ00059 246 aaKnown RBP12.58□□□□□ -0.4
COPA-202ENST00000368069 TRIM65Q6PJ69 517 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
COPA-202ENST00000368069 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 PPP2R2AP63151 447 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
COPA-202ENST00000368069 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
COPA-202ENST00000368069 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 ELAC2Q9BQ52 826 aaKnown RBP12.57□□□□□ -0.4
COPA-202ENST00000368069 EXOC1LA0A1B0GW35 172 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 IPO5O00410 1097 aaKnown RBP12.57□□□□□ -0.4
COPA-202ENST00000368069 PMS2P54278 862 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 IGBP1P78318 339 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 E2F4Q16254 413 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 BEND6Q5SZJ8 279 aaPredicted RBP12.57□□□□□ -0.4
COPA-202ENST00000368069 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 EMSYQ7Z589 1322 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 SLC37A4O43826 429 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 CCDC38Q502W7 563 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 TTI2Q6NXR4 508 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 GADL1Q6ZQY3 521 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 TRAPPC11Q7Z392 1133 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 NLRP14Q86W24 1093 aa12.57□□□□□ -0.4
COPA-202ENST00000368069 PROCA1Q8NCQ7 364 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms