RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 VIMP08670 466 aaKnown RBP18.59■□□□□ 0.57
PRKCD-201ENST00000330452 OPTNQ96CV9 577 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 SYT15Q9BQS2 421 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 DDX4Q9NQI0 724 aaKnown RBP18.59■□□□□ 0.57
PRKCD-201ENST00000330452 CDK5RAP2Q96SN8 1893 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 GMNCA6NCL1 334 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 KRT86O43790 486 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 HOXA10P31260 410 aaPredicted RBP18.59■□□□□ 0.57
PRKCD-201ENST00000330452 TCP10Q12799 353 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 TAF11Q15544 211 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 LCA5Q86VQ0 697 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 ZSCAN29Q8IWY8 852 aaPredicted RBP18.59■□□□□ 0.57
PRKCD-201ENST00000330452 CACNA2D3Q8IZS8 1091 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 NLGN1Q8N2Q7 840 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 RETREG2Q8NC44 543 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 GJA10Q969M2 543 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 DAGLAQ9Y4D2 1042 aa18.59■□□□□ 0.57
PRKCD-201ENST00000330452 ZNF263O14978 683 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 AKR1B1P15121 316 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 PLCG2P16885 1265 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 ZNF268Q14587 947 aaPredicted RBP18.58■□□□□ 0.57
PRKCD-201ENST00000330452 CENPPQ6IPU0 288 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 DEFB132Q7Z7B7 95 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 GLIS3Q8NEA6 775 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 ERGIC2Q96RQ1 377 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.57
PRKCD-201ENST00000330452 RGS17Q9UGC6 210 aaPredicted RBP18.58■□□□□ 0.57
PRKCD-201ENST00000330452 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.57
PRKCD-201ENST00000330452 ZNF185O15231 689 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 RAD21O60216 631 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 IDEP14735 1019 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 CCND1P24385 295 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 PRPF4BQ13523 1007 aaKnown RBP18.58■□□□□ 0.56
PRKCD-201ENST00000330452 LBRQ14739 615 aaKnown RBP18.58■□□□□ 0.56
PRKCD-201ENST00000330452 FKBP15Q5T1M5 1219 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 PAPD7Q5XG87 772 aaKnown RBP18.58■□□□□ 0.56
PRKCD-201ENST00000330452 PPP4R3AQ6IN85 833 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 KCNK18Q7Z418 384 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 ZFPM1Q8IX07 1006 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 LARP4BQ92615 738 aaKnown RBP18.58■□□□□ 0.56
PRKCD-201ENST00000330452 MTMR4Q9NYA4 1195 aa18.58■□□□□ 0.56
PRKCD-201ENST00000330452 SMARCA1P28370 1054 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 ADCY7P51828 1080 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 MRPS35P82673 323 aaKnown RBP18.57■□□□□ 0.56
PRKCD-201ENST00000330452 LRRC41Q15345 812 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 UBE2SQ16763 222 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 SMCR8Q8TEV9 937 aaPredicted RBP18.57■□□□□ 0.56
PRKCD-201ENST00000330452 CDK5RAP3Q96JB5 506 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 UIMC1Q96RL1 719 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 KCNMB3Q9NPA1 279 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 ESYT2A0FGR8 921 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 PENKP01210 267 aaPredicted RBP18.57■□□□□ 0.56
PRKCD-201ENST00000330452 PSMC4P43686 418 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 NOVP48745 357 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 TNNI2P48788 182 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 CCNG1P51959 295 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 NFIAQ12857 509 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 SGSM1Q2NKQ1 1148 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 MAEAQ7L5Y9 396 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 TMEM110Q86TL2 294 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 ERICH1Q86X53 443 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 C2CD5Q86YS7 1000 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 FAM81BQ96LP2 452 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 CRAMP1Q96RY5 1269 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 ARHGEF10LQ9HCE6 1279 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 VIL1P09327 827 aaKnown RBP18.57■□□□□ 0.56
PRKCD-201ENST00000330452 ZNF772Q68DY9 489 aaPredicted RBP18.57■□□□□ 0.56
PRKCD-201ENST00000330452 UNC13DQ70J99 1090 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 TBC1D1Q86TI0 1168 aaPredicted RBP18.57■□□□□ 0.56
PRKCD-201ENST00000330452 SMYD1Q8NB12 490 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 CCDC42Q96M95 316 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 NDNQ99608 321 aa18.57■□□□□ 0.56
PRKCD-201ENST00000330452 GAKO14976 1311 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 C5orf60A6NFR6 353 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 VWA3BQ502W6 1294 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 GLE1Q53GS7 698 aaKnown RBP18.56■□□□□ 0.56
PRKCD-201ENST00000330452 TRIM68Q6AZZ1 485 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 CCDC155Q8N6L0 562 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 SNX29Q8TEQ0 813 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 WDR37Q9Y2I8 494 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 F8VZ95 297 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 PDE2AO00408 941 aaPredicted RBP18.56■□□□□ 0.56
PRKCD-201ENST00000330452 PPP1R2P41236 205 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 FXR2P51116 673 aaKnown RBP eCLIP18.56■□□□□ 0.56
PRKCD-201ENST00000330452 ECM1Q16610 540 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 TTBK2Q6IQ55 1244 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 ZNF662Q6ZS27 426 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 MMRN2Q9H8L6 949 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 ARHGAP20Q9P2F6 1191 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
PRKCD-201ENST00000330452 ZNF233A6NK53 670 aa18.55■□□□□ 0.56
PRKCD-201ENST00000330452 CKAP4Q07065 602 aaKnown RBP18.55■□□□□ 0.56
PRKCD-201ENST00000330452 BTG3Q14201 252 aaPredicted RBP18.55■□□□□ 0.56
PRKCD-201ENST00000330452 TMEM266Q2M3C6 531 aa18.55■□□□□ 0.56
PRKCD-201ENST00000330452 RNF168Q8IYW5 571 aaPredicted RBP18.55■□□□□ 0.56
PRKCD-201ENST00000330452 KCNV2Q8TDN2 545 aa18.55■□□□□ 0.56
PRKCD-201ENST00000330452 DDX12PQ92771 950 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms