RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 KIAA0753Q2KHM9 967 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 KLHL40Q2TBA0 621 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 DCAF4L1Q3SXM0 396 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 GPBP1Q86WP2 473 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 FAM114A1Q8IWE2 563 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 DEPTORQ8TB45 409 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 PARVGQ9HBI0 331 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 OLFML3Q9NRN5 406 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 TFIP11Q9UBB9 837 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 KIAA1024Q9UPX6 916 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 BAZ2BQ9UIF8 2168 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 IGKV6-21A0A0C4DH24 114 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 DDX39AO00148 427 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 GPR182O15218 404 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 XPOTO43592 962 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 STX10O60499 249 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 SLITRK3O94933 977 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 ARIH2O95376 493 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 CCNE2O96020 404 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 PLCG1P19174 1290 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 RPL13P26373 211 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 MARCKSP29966 332 aaPredicted RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 RARRES1P49788 294 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 CRYBB1P53674 252 aaPredicted RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 FAM187BQ17R55 369 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 EARS2Q5JPH6 523 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 CD302Q8IX05 232 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 TMEM199Q8N511 208 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 ANKRD20A12PQ8NF67 263 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 C16orf70Q9BSU1 422 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 CLSTN2Q9H4D0 955 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 PDGFCQ9NRA1 345 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 KBTBD4Q9NVX7 518 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 DACT1Q9NYF0 836 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 FAM205CA6NFA0 338 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 BAIAP3O94812 1187 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 LDHAP00338 332 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 CYP2C9P11712 490 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 PLS3P13797 630 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 GRB10Q13322 594 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 DHX8Q14562 1220 aaKnown RBP5.72□□□□□ -1.49
LRIT3-201ENST00000327908 NFIL3Q16649 462 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 CATSPER3Q86XQ3 398 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 SH3TC2Q8TF17 1288 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 SEPT8Q92599 483 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 ABHD8Q96I13 439 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 ACCSQ96QU6 501 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 ADPGKQ9BRR6 497 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 GJB4Q9NTQ9 266 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 ANO10Q9NW15 660 aa5.72□□□□□ -1.49
LRIT3-201ENST00000327908 KIAA0355O15063 1070 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 ATP9AO75110 1047 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 ZNF202O95125 648 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 GNA14O95837 355 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 TAL1P17542 331 aaPredicted RBP5.71□□□□□ -1.49
LRIT3-201ENST00000327908 CDK7P50613 346 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 ZNF131P52739 623 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 ASIC1P78348 528 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 MRPS6P82932 125 aaKnown RBP5.71□□□□□ -1.49
LRIT3-201ENST00000327908 NAALADL2Q58DX5 795 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 FAM47CQ5HY64 1035 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 PSRC1Q6PGN9 363 aaPredicted RBP5.71□□□□□ -1.49
LRIT3-201ENST00000327908 MTHFD1LQ6UB35 978 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 SLC39A5Q6ZMH5 540 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 SERINC5Q86VE9 423 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 CCDC60Q8IWA6 550 aaPredicted RBP5.71□□□□□ -1.49
LRIT3-201ENST00000327908 MLKLQ8NB16 471 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 PGBD4Q96DM1 585 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 SCLT1Q96NL6 688 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 LBHD1Q9BQE6 289 aaPredicted RBP5.71□□□□□ -1.49
LRIT3-201ENST00000327908 PKD2L1Q9P0L9 805 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 TSKSQ9UJT2 592 aa5.71□□□□□ -1.49
LRIT3-201ENST00000327908 POTEMA6NI47 508 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 MAPK13O15264 365 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 CALUO43852 315 aaPredicted RBP5.71□□□□□ -1.5
LRIT3-201ENST00000327908 CLTBP09497 229 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 STAG3L1P0CL83 205 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 INSRRP14616 1297 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 SELPP16109 830 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 AP3M2P53677 418 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 SASS6Q6UVJ0 657 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 ZPBP2Q6X784 338 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 DDX49Q9Y6V7 483 aaKnown RBP5.71□□□□□ -1.5
LRIT3-201ENST00000327908 SCN10AQ9Y5Y9 1956 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 CNTNAP2Q9UHC6 1331 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.71□□□□□ -1.5
LRIT3-201ENST00000327908 PSMA7O14818 248 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 POLR2DO15514 142 aaKnown RBP5.71□□□□□ -1.5
LRIT3-201ENST00000327908 PPFIA3O75145 1194 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 C22orf31O95567 290 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 SPATA31C1P0DKV0 1188 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 CEBPZQ03701 1054 aaKnown RBP5.71□□□□□ -1.5
LRIT3-201ENST00000327908 SPAG1Q07617 926 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 NBPF20Q3BBV1 942 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 MTERF2Q49AM1 385 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 NT5DC4Q86YG4 428 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 FMNL3Q8IVF7 1028 aa5.71□□□□□ -1.5
LRIT3-201ENST00000327908 FMR1NBQ8N0W7 255 aaPredicted RBP5.71□□□□□ -1.5
LRIT3-201ENST00000327908 TMEM174Q8WUU8 243 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms