RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ARP10275 920 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 PPFIA1Q13136 1202 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 TBC1D10BQ4KMP7 808 aaPredicted RBP19■□□□□ 0.63
COL9A1-201ENST00000320755 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 DDX47Q9H0S4 455 aaKnown RBP19■□□□□ 0.63
COL9A1-201ENST00000320755 GDF3Q9NR23 364 aa19■□□□□ 0.63
COL9A1-201ENST00000320755 PSMC2P35998 433 aaKnown RBP18.99■□□□□ 0.63
COL9A1-201ENST00000320755 TNNC1P63316 161 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 CDAN1Q8IWY9 1227 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 SYCP3Q8IZU3 236 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 PPP1R12BO60237 982 aaPredicted RBP18.99■□□□□ 0.63
COL9A1-201ENST00000320755 EVI5O60447 810 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 NAA35Q5VZE5 725 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 MCTP2Q6DN12 878 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 C1orf186Q6ZWK4 172 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 ADAT2Q7Z6V5 191 aaKnown RBP18.99■□□□□ 0.63
COL9A1-201ENST00000320755 METTL13Q8N6R0 699 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 ZBTB21Q9ULJ3 1066 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 GOLGA8KD6RF30 607 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 PPIP5K2O43314 1243 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 CCT5P48643 541 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 HDLBPQ00341 1268 aaKnown RBP18.99■□□□□ 0.63
COL9A1-201ENST00000320755 NNTQ13423 1086 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 ALS2CLQ60I27 953 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 MAATS1Q7Z4T9 603 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 TPCN2Q8NHX9 752 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 ZNF577Q9BSK1 485 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 ARHGEF10LQ9HCE6 1279 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 OSGEPQ9NPF4 335 aa18.99■□□□□ 0.63
COL9A1-201ENST00000320755 GREB1LQ9C091 1923 aaPredicted RBP18.98■□□□□ 0.63
COL9A1-201ENST00000320755 SHTN1A0MZ66 631 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 SLC26A4O43511 780 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 ZEB2O60315 1214 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 LRRN2O75325 713 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 PPFIA4O75335 1185 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 RPS6KA5O75582 802 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 RAD17O75943 681 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 STAT1P42224 750 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 PRPF4BQ13523 1007 aaKnown RBP18.98■□□□□ 0.63
COL9A1-201ENST00000320755 HS2ST1Q7LGA3 356 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 CAVIN3Q969G5 261 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 MRIQ9BWK5 157 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 PCIF1Q9H4Z3 704 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 DNAJC12Q9UKB3 198 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 PSMD10O75832 226 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 ITGA4P13612 1032 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 MMP14P50281 582 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 GALCP54803 685 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 PDCLQ13371 301 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 DRAP1Q14919 205 aaPredicted RBP18.98■□□□□ 0.63
COL9A1-201ENST00000320755 CBWD6Q4V339 395 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 CBWD3Q5JTY5 395 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 CBWD5Q5RIA9 395 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 TMOD2Q9NZR1 351 aa18.98■□□□□ 0.63
COL9A1-201ENST00000320755 KRIT1O00522 736 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 GAP43P17677 238 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 IFI16Q16666 785 aaKnown RBP18.97■□□□□ 0.63
COL9A1-201ENST00000320755 BCAS4Q8TDM0 211 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 C10orf71Q711Q0 1435 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 SIPA1L1O43166 1804 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 ZNF233A6NK53 670 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 CYP3A4P08684 503 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 BMT2Q1RMZ1 405 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 C10orf76Q5T2E6 689 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 BTNL9Q6UXG8 535 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 LRRC57Q8N9N7 239 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 HOOK2Q96ED9 719 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 SH3GL2Q99962 352 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 OLFML3Q9NRN5 406 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 FRMD4BQ9Y2L6 1034 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 ZMYM2Q9UBW7 1377 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 YDJCA8MPS7 323 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 TISP43B9A030 160 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 SLC16A3O15427 465 aaKnown RBP18.97■□□□□ 0.63
COL9A1-201ENST00000320755 EXOC3O60645 756 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 FMO5P49326 533 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 CEP55Q53EZ4 464 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 RUBCNQ92622 972 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 GLIS2Q9BZE0 524 aaPredicted RBP18.97■□□□□ 0.63
COL9A1-201ENST00000320755 UNC45AQ9H3U1 944 aa18.97■□□□□ 0.63
COL9A1-201ENST00000320755 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
COL9A1-201ENST00000320755 NOC2LQ9Y3T9 749 aaKnown RBP18.97■□□□□ 0.63
COL9A1-201ENST00000320755 SART1O43290 800 aaKnown RBP18.96■□□□□ 0.63
COL9A1-201ENST00000320755 C21orf2O43822 256 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 PRELPP51888 382 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 JAM2P57087 298 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 ZNF720Q7Z2F6 126 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 LNX1Q8TBB1 728 aaPredicted RBP18.96■□□□□ 0.63
COL9A1-201ENST00000320755 TRIM31Q9BZY9 425 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 AMACRQ9UHK6 382 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 ENTPD3O75355 529 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 OR2W6PQ8NHA6 318 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 AKT1S1Q96B36 256 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 LXNQ9BS40 222 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 RASSF4Q9H2L5 321 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 SAMM50Q9Y512 469 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 STK24Q9Y6E0 443 aa18.96■□□□□ 0.63
COL9A1-201ENST00000320755 PRKCIP41743 596 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms