RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SEPT2Q15019 361 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
CCDC8-201ENST00000307522 DGKHQ86XP1 1220 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 TBC1D5Q92609 795 aa17.62■□□□□ 0.41
CCDC8-201ENST00000307522 NKX1-2Q9UD57 310 aaPredicted RBP17.62■□□□□ 0.41
CCDC8-201ENST00000307522 SEC63Q9UGP8 760 aaKnown RBP17.62■□□□□ 0.41
CCDC8-201ENST00000307522 NQO1P15559 274 aaKnown RBP17.61■□□□□ 0.41
CCDC8-201ENST00000307522 SESN3P58005 492 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 JAG1P78504 1218 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 KIAA0753Q2KHM9 967 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 NAALADL2Q58DX5 795 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 FZD1Q9UP38 647 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 PLAGL2Q9UPG8 496 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 PCDHGC5Q9Y5F6 944 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 MYH1P12882 1939 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 SART1O43290 800 aaKnown RBP17.61■□□□□ 0.41
CCDC8-201ENST00000307522 PCK1P35558 622 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 LRRC41Q15345 812 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 ZFATQ9P243 1243 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 RREB1Q92766 1687 aa17.61■□□□□ 0.41
CCDC8-201ENST00000307522 PAPOLAP51003 745 aaKnown RBP17.6■□□□□ 0.41
CCDC8-201ENST00000307522 GRM4Q14833 912 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 RNF220Q5VTB9 566 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 RMND1Q9NWS8 449 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 SAMD15Q9P1V8 674 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 GGA2Q9UJY4 613 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 ANKRD33BA6NCL7 494 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 SSR1P43307 286 aaKnown RBP17.6■□□□□ 0.41
CCDC8-201ENST00000307522 NCALDP61601 193 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 PRPF4BQ13523 1007 aaKnown RBP17.6■□□□□ 0.41
CCDC8-201ENST00000307522 ZC3H12AQ5D1E8 599 aaKnown RBP17.6■□□□□ 0.41
CCDC8-201ENST00000307522 PPP1R15BQ5SWA1 713 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 SOGA3Q5TF21 947 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 AZI2Q9H6S1 392 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 BATF3Q9NR55 127 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 ARAP2Q8WZ64 1704 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 SBF2Q86WG5 1849 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 CASZ1Q86V15 1759 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 STXBP3O00186 592 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 ATP2C1P98194 919 aaPredicted RBP17.6■□□□□ 0.41
CCDC8-201ENST00000307522 LAMB3Q13751 1172 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 LLGL1Q15334 1064 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 ZNF572Q7Z3I7 529 aaPredicted RBP17.6■□□□□ 0.41
CCDC8-201ENST00000307522 USP38Q8NB14 1042 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 GLIS3Q8NEA6 775 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 TBCKQ8TEA7 893 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 TNFRSF25Q93038 417 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 MTMR4Q9NYA4 1195 aa17.6■□□□□ 0.41
CCDC8-201ENST00000307522 TDP2O95551 362 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 TBC1D25Q3MII6 688 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 RUFY4Q6ZNE9 571 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 MREGQ8N565 214 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 THAP9Q9H5L6 903 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 FGFR1OP2Q9NVK5 253 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 PCDHA4Q9UN74 947 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 SLC12A4Q9UP95 1085 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 NEFHP12036 1026 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 TNFRSF8P28908 595 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 SHMT1P34896 483 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 ERFP50548 548 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 TNNC1P63316 161 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 ITIH3Q06033 890 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 DYMQ7RTS9 669 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 NEDD1Q8NHV4 660 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 TAF4BQ92750 862 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 P2RX5Q93086 422 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 INPP4AQ96PE3 977 aaPredicted RBP17.59■□□□□ 0.41
CCDC8-201ENST00000307522 C5orf60A6NFR6 353 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 YDJCA8MPS7 323 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 KLRC4O43908 158 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 RARAP10276 462 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 UBXN2AP68543 259 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 DGKZQ13574 1117 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 FAM129AQ9BZQ8 928 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 NUCKS1Q9H1E3 243 aaKnown RBP17.59■□□□□ 0.41
CCDC8-201ENST00000307522 ADAM22Q9P0K1 906 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 CORO1CQ9ULV4 474 aaPredicted RBP17.59■□□□□ 0.41
CCDC8-201ENST00000307522 NR2E1Q9Y466 385 aa17.59■□□□□ 0.41
CCDC8-201ENST00000307522 MARCH6O60337 910 aa17.58■□□□□ 0.41
CCDC8-201ENST00000307522 PRLRP16471 622 aa17.58■□□□□ 0.41
CCDC8-201ENST00000307522 ATP2A2P16615 1042 aaKnown RBP17.58■□□□□ 0.41
CCDC8-201ENST00000307522 UBA7P41226 1012 aa17.58■□□□□ 0.41
CCDC8-201ENST00000307522 BLMHQ13867 455 aa17.58■□□□□ 0.41
CCDC8-201ENST00000307522 RAPGEF1Q13905 1077 aa17.58■□□□□ 0.41
CCDC8-201ENST00000307522 ERMARDQ5T6L9 678 aa17.58■□□□□ 0.41
CCDC8-201ENST00000307522 SH3BP5LQ7L8J4 393 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms