RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 PGBD4Q96DM1 585 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 EIF2AK1Q9BQI3 630 aaKnown RBP20.75■□□□□ 0.91
LSM11-201ENST00000286307 SYNDIG1Q9H7V2 258 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 A0A1W2PQ27 194 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 A0A1W2PQ64 194 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 A0A1W2PQD8 194 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 CPA4Q9UI42 421 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 FARP1Q9Y4F1 1045 aaPredicted RBP20.75■□□□□ 0.91
LSM11-201ENST00000286307 IQCB1Q15051 598 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 NEK9Q8TD19 979 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 MTMR4Q9NYA4 1195 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 CCDC160A6NGH7 325 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 PSMA2P25787 234 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 UHMK1Q8TAS1 419 aaKnown RBP20.75■□□□□ 0.91
LSM11-201ENST00000286307 CHAMP1Q96JM3 812 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 ACAP3Q96P50 834 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 KIAA1586Q9HCI6 787 aa20.75■□□□□ 0.91
LSM11-201ENST00000286307 DDX41Q9UJV9 622 aaKnown RBP20.75■□□□□ 0.91
LSM11-201ENST00000286307 MYL1P05976 194 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 NECTIN1Q15223 517 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 ARL6IP4Q66PJ3 421 aaKnown RBP20.74■□□□□ 0.91
LSM11-201ENST00000286307 LRRC31Q6UY01 552 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 VCPKMTQ9H867 229 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 PLCB1Q9NQ66 1216 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 LARGE1O95461 756 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 NUDT18Q6ZVK8 323 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 SCYL3Q8IZE3 742 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 PFASO15067 1338 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 MOCS2O96007 188 aaPredicted RBP20.74■□□□□ 0.91
LSM11-201ENST00000286307 PPP1R2P3Q6NXS1 205 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 OXER1Q8TDS5 423 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 DYNC1I1O14576 645 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 CEP85LQ5SZL2 805 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 SAAL1Q96ER3 474 aa20.74■□□□□ 0.91
LSM11-201ENST00000286307 MYBP10242 640 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 EEF1GP26641 437 aaKnown RBP20.73■□□□□ 0.91
LSM11-201ENST00000286307 CASP14P31944 242 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 LINC00301Q8NCQ3 95 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 PRRG1O14668 218 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 TDP2O95551 362 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 YWHABP31946 246 aaKnown RBP20.73■□□□□ 0.91
LSM11-201ENST00000286307 DGKDQ16760 1214 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 DDX53Q86TM3 631 aaKnown RBP20.73■□□□□ 0.91
LSM11-201ENST00000286307 RAD54LQ92698 747 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 A8MXQ7 604 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 GCLMP48507 274 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 PPP6R3Q5H9R7 873 aaPredicted RBP20.73■□□□□ 0.91
LSM11-201ENST00000286307 TMTC4Q5T4D3 741 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 LRRD1A4D1F6 860 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 TRAPPC3O43617 180 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 MTMR3Q13615 1198 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 SPATA2LQ8IUW3 424 aaPredicted RBP20.73■□□□□ 0.91
LSM11-201ENST00000286307 TMEM63CQ9P1W3 806 aa20.73■□□□□ 0.91
LSM11-201ENST00000286307 RGL2O15211 777 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 PDE1BQ01064 536 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 C17orf53Q8N3J3 647 aaPredicted RBP20.72■□□□□ 0.91
LSM11-201ENST00000286307 TYW1Q9NV66 732 aaKnown RBP20.72■□□□□ 0.91
LSM11-201ENST00000286307 CPP00450 1065 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 PMLP29590 882 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 STRIP2Q9ULQ0 834 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 XXYLT1Q8NBI6 393 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 FHDC1Q9C0D6 1143 aaPredicted RBP20.72■□□□□ 0.91
LSM11-201ENST00000286307 ATP11BQ9Y2G3 1177 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 PNPLA6Q8IY17 1366 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 M0QYV0 167 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 ORC4O43929 436 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 NME3Q13232 169 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 RAB44Q7Z6P3 723 aaPredicted RBP20.72■□□□□ 0.91
LSM11-201ENST00000286307 EIF3CLB5ME19 914 aaKnown RBP20.72■□□□□ 0.91
LSM11-201ENST00000286307 TMEM270Q6UE05 265 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 RUFY4Q6ZNE9 571 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 TMEM143Q96AN5 459 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 OPTNQ96CV9 577 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 EIF3CQ99613 913 aaKnown RBP20.72■□□□□ 0.91
LSM11-201ENST00000286307 DYRK4Q9NR20 520 aa20.72■□□□□ 0.91
LSM11-201ENST00000286307 PRKCBP05771 671 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 GDAP1L1Q96MZ0 367 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 BASP1P80723 227 aaKnown RBP20.71■□□□□ 0.91
LSM11-201ENST00000286307 ATG4CQ96DT6 458 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 RWDD2AQ9UIY3 292 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 DCDC2CA8MYV0 355 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 CREB3O43889 395 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 KRT71Q3SY84 523 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 SH2D3AQ9BRG2 576 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 OLA1Q9NTK5 396 aaKnown RBP20.71■□□□□ 0.91
LSM11-201ENST00000286307 PRR12Q9ULL5 1215 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 CROCCP2Q86T23 111 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 PLEKHH3Q7Z736 793 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 POLLQ9UGP5 575 aa20.71■□□□□ 0.91
LSM11-201ENST00000286307 EPN1Q9Y6I3 576 aaPredicted RBP20.71■□□□□ 0.91
LSM11-201ENST00000286307 F8W8V4 182 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 CCDC62Q6P9F0 684 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 STMN2Q93045 179 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 RALAP11233 206 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 CCNE1P24864 410 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 OR1G1P47890 313 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 SLC12A1Q13621 1099 aa20.7■□□□□ 0.9
LSM11-201ENST00000286307 PPP4R3CPQ6ZMV5 832 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms