RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 BNIP1Q12981 228 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 GBP7Q8N8V2 638 aaPredicted RBP14.24□□□□□ -0.13
NUP54-201ENST00000264883 FAM81AQ8TBF8 368 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 CALML4Q96GE6 196 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 PBKQ96KB5 322 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 TMEM60Q9H2L4 133 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 LRRC42Q9Y546 428 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 CES2O00748 559 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 WFS1O76024 890 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 KLRC1P26715 233 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 GBP1P32455 592 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 CUL3Q13618 768 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 PDIA5Q14554 519 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
NUP54-201ENST00000264883 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
NUP54-201ENST00000264883 MTFR1LQ9H019 292 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 ZCWPW1Q9H0M4 648 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 CD2APQ9Y5K6 639 aa14.24□□□□□ -0.13
NUP54-201ENST00000264883 SNX3O60493 162 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 SHBGP04278 402 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 PDHA1P08559 390 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 STK4Q13043 487 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 ADAM9Q13443 819 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 RPS6KA1Q15418 735 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 SGSM1Q2NKQ1 1148 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 PDXDC1Q6P996 788 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 GUF1Q8N442 669 aaKnown RBP14.23□□□□□ -0.13
NUP54-201ENST00000264883 PNMA1Q8ND90 353 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 FBF1Q8TES7 1133 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 ZNF526Q8TF50 670 aaPredicted RBP14.23□□□□□ -0.13
NUP54-201ENST00000264883 BAP1Q92560 729 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 AP1M1Q9BXS5 423 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
NUP54-201ENST00000264883 ADAM7Q9H2U9 754 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 CCDC134Q9H6E4 229 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 PP2D1A8MPX8 630 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 SMIM22K7EJ46 135 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 CEP104O60308 925 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 COQ9O75208 318 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 GYG1P46976 350 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 INF2Q27J81 1249 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 FAM47AQ5JRC9 791 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 UNC13DQ70J99 1090 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 CCDC125Q86Z20 511 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 RBM41Q96IZ5 413 aaKnown RBP14.23□□□□□ -0.13
NUP54-201ENST00000264883 SYT15Q9BQS2 421 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 RIC8AQ9NPQ8 531 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 ATP8A1Q9Y2Q0 1164 aa14.23□□□□□ -0.13
NUP54-201ENST00000264883 USP15Q9Y4E8 981 aaPredicted RBP14.23□□□□□ -0.13
NUP54-201ENST00000264883 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 A0A1B0GVG6 124 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 PYGBP11216 843 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 GNAZP19086 355 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 ATP6V1C1P21283 382 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 PDE6CP51160 858 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.13
NUP54-201ENST00000264883 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
NUP54-201ENST00000264883 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 SV2BQ7L1I2 683 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 TSG101Q99816 390 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 ZMYND12Q9H0C1 365 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 NMT2O60551 498 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 OAS1P00973 400 aaKnown RBP14.22□□□□□ -0.13
NUP54-201ENST00000264883 GNA11P29992 359 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 IFNAR2P48551 515 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
NUP54-201ENST00000264883 KCTD19Q17RG1 926 aaPredicted RBP14.22□□□□□ -0.13
NUP54-201ENST00000264883 SLC9C1Q4G0N8 1177 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 PRR5LQ6MZQ0 368 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 TMEM154Q6P9G4 183 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 ASRGL1Q7L266 308 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 ACTRT1Q8TDG2 376 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.131e-10■■■□□ 14.7
NUP54-201ENST00000264883 PGM2Q96G03 612 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 FAM114A2Q9NRY5 505 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 G3BP2Q9UN86 482 aaKnown RBP14.22□□□□□ -0.13
NUP54-201ENST00000264883 MINPP1Q9UNW1 487 aa14.22□□□□□ -0.13
NUP54-201ENST00000264883 PPFIA2O75334 1257 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 SUN1O94901 812 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 BAG6P46379 1132 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 SPDYCQ5MJ68 293 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 FBXO33Q7Z6M2 555 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 BICD1Q96G01 975 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 SEMA6BQ9H3T3 888 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 NKX1-2Q9UD57 310 aaPredicted RBP14.21□□□□□ -0.13
NUP54-201ENST00000264883 AMACRQ9UHK6 382 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 MAD2L2Q9UI95 211 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 TRIM33Q9UPN9 1127 aa14.21□□□□□ -0.13
NUP54-201ENST00000264883 TLDC2A0PJX2 215 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 CCDC188H7C350 402 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 PGRMC1O00264 195 aaKnown RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 ADAMTS3O15072 1205 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
NUP54-201ENST00000264883 SMARCA1P28370 1054 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 KLC1Q07866 573 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 PLS1Q14651 629 aa14.2□□□□□ -0.14
NUP54-201ENST00000264883 CMPK2Q5EBM0 449 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms