RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 TMBIM4Q9HC24 238 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 IL17RBQ9NRM6 502 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 TNFAIP3P21580 790 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 RFC5P40937 340 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 MAP7Q14244 749 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 PDCD2Q16342 344 aaPredicted RBP14.36□□□□□ -0.11
CCDC117-201ENST00000249064 OLFML2BQ68BL8 750 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 ISLR2Q6UXK2 745 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 KIAA0825Q8IV33 1275 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 MYOCDQ8IZQ8 938 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 GLG1Q92896 1179 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 DHTKD1Q96HY7 919 aaPredicted RBP14.36□□□□□ -0.11
CCDC117-201ENST00000249064 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 TRIM9Q9C026 710 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 VCX3BQ9H321 246 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 THAP9Q9H5L6 903 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 VCX3AQ9NNX9 186 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 FAM237AA0A1B0GTK4 181 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 ARHGAP42A6NI28 874 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 ORC4O43929 436 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 UBXN2AP68543 259 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 PABPC4Q13310 644 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 PRR16Q569H4 304 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 SEL1L2Q5TEA6 688 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 FBXO33Q7Z6M2 555 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 NAP1L3Q99457 506 aaPredicted RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 TTC1Q99614 292 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 BARHL2Q9NY43 387 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 MTUS1Q9ULD2 1270 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 ZBTB21Q9ULJ3 1066 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 NOC2LQ9Y3T9 749 aaKnown RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 ITIH6Q6UXX5 1313 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 PYGLP06737 847 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 PCP11498 1178 aaKnown RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 LONRF1Q17RB8 773 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 FAM26FQ5R3K3 315 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 NT5DC1Q5TFE4 455 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 ALKBH5Q6P6C2 394 aaKnown RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 MORC4Q8TE76 937 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 DDX12PQ92771 950 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 DDX25Q9UHL0 483 aaKnown RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 SHBGP04278 402 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 FNTAP49354 379 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 MAN2A1Q16706 1144 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 GSDMBQ8TAX9 411 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 RNF14Q9UBS8 474 aa14.35□□□□□ -0.11
CCDC117-201ENST00000249064 SIPA1L3O60292 1781 aaPredicted RBP14.35□□□□□ -0.11
CCDC117-201ENST00000249064 NPHP3-ACAD11A0A0J9YXS1 232 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 CCDC189A1A4V9 331 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 E9PMD0 336 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 IRF6O14896 467 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 TBCAO75347 108 aaKnown RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 PECAM1P16284 738 aaPredicted RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 KCNA3P22001 575 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 TARSP26639 723 aaKnown RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 PMS2P54278 862 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 SUPT20HQ8NEM7 779 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 ERP27Q96DN0 273 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 PACSIN1Q9BY11 444 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 C2CD2Q9Y426 696 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 BCL9O00512 1426 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 TRAPPC3O43617 180 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 RASSF9O75901 435 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 RNASELQ05823 741 aaKnown RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 SLC29A2Q14542 456 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 TMED2Q15363 201 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 CCDC65Q8IXS2 484 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 DNAJC9Q8WXX5 260 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 TGS1Q96RS0 853 aaKnown RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 ARHGAP20Q9P2F6 1191 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 ANAPC4Q9UJX5 808 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 CYTH3O43739 400 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 BRAFP15056 766 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 PLCG2P16885 1265 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 MESDQ14696 234 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 GRM4Q14833 912 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 CCDC62Q6P9F0 684 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 CLEC4GQ6UXB4 293 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 PPP1R14CQ8TAE6 165 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 FBXO41Q8TF61 875 aa14.34□□□□□ -0.11
CCDC117-201ENST00000249064 USP15Q9Y4E8 981 aaPredicted RBP14.34□□□□□ -0.11
CCDC117-201ENST00000249064 DDX39AO00148 427 aaKnown RBP14.33□□□□□ -0.11
CCDC117-201ENST00000249064 CLIC2O15247 247 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 SRGNP10124 158 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 ATP4AP20648 1035 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 RCAN1P53805 252 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 ZNF844Q08AG5 666 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 FUT2Q10981 343 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.11
CCDC117-201ENST00000249064 TNIP1Q15025 636 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 SF3B3Q15393 1217 aaKnown RBP14.33□□□□□ -0.11
CCDC117-201ENST00000249064 FAM83BQ5T0W9 1011 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 FYB2Q5VWT5 728 aa14.33□□□□□ -0.11
CCDC117-201ENST00000249064 WDR59Q6PJI9 974 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms