RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 MAGED2Q9UNF1 606 aaPredicted RBP10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 SPATA31A1Q5TZJ5 1347 aa10.55□□□□□ -0.72
CLTCL1-211ENST00000621271 FCGRTP55899 365 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 EZH2Q15910 746 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 DARS2Q6PI48 645 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 USP17L6PQ6QN14 398 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 ZNF280CQ8ND82 737 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 RABGGTAQ92696 567 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 PPP1R13BQ96KQ4 1090 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 DCP1AQ9NPI6 582 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 CDK12Q9NYV4 1490 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 A0A1W2PQ27 194 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 A0A1W2PQ64 194 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 A0A1W2PQD8 194 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 PLCG1P19174 1290 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 RAD51Q06609 339 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 SLC44A5Q8NCS7 719 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 FAM71BQ8TC56 605 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 NUDT12Q9BQG2 462 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 FANCLQ9NW38 375 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 UPP2O95045 317 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 INHBAP08476 426 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 TCP1P17987 556 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 GPC3P51654 580 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 KPNA2P52292 529 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 DYNLT1P63172 113 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 ZNF699Q32M78 642 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 ACCSLQ4AC99 568 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 RSBN1LQ6PCB5 846 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 FAM20AQ96MK3 541 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 NUDCD1Q96RS6 583 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 NGRNQ9NPE2 291 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 RNF40O75150 1001 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 CDC25AP30304 524 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 MAP2K2P36507 400 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 QARSP47897 775 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 CDC42EP1Q00587 391 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 ADCK5Q3MIX3 580 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 ANKRD13AQ8IZ07 590 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 LPAR1Q92633 364 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 CABS1Q96KC9 395 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 DPH5Q9H2P9 285 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 HAUS4Q9H6D7 363 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 P4HBP07237 508 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 NSUN7Q8NE18 718 aaKnown RBP10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 RABEP2Q9H5N1 569 aa10.54□□□□□ -0.72
CLTCL1-211ENST00000621271 RNF17Q9BXT8 1623 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 LRRD1A4D1F6 860 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 SLFN14P0C7P3 912 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 CTNNA1P35221 906 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 CLNS1AP54105 237 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 ATP11AP98196 1134 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 CDO1Q16878 200 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 STYK1Q6J9G0 422 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 FAM117BQ6P1L5 589 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 TOGARAM2Q6ZUX3 1019 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 TMTC3Q6ZXV5 915 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 DEFB132Q7Z7B7 95 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 MGARPQ8TDB4 240 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PGBD4Q96DM1 585 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PCDHA5Q9Y5H7 936 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PLEKHA8P1O95397 391 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 KIF23Q02241 960 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 KIAA1755Q5JYT7 1200 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 ZNF658Q5TYW1 1059 aaPredicted RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 CACNA2D3Q8IZS8 1091 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 MRPL4Q9BYD3 311 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 SLC7A5P2Q9GIP4 190 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 KIF1BO60333 1816 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 SFI1A8K8P3 1242 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 GFPT2O94808 682 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 MOCS3O95396 460 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PSMC5P62195 406 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 ASPHQ12797 758 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 SH2D4BQ5SQS7 431 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 ARL6IP4Q66PJ3 421 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 GPRC5AQ8NFJ5 357 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PDCD6IPQ8WUM4 868 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 PDLIM2Q96JY6 352 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 ACAP3Q96P50 834 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 DESI2Q9BSY9 194 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 TLK1Q9UKI8 766 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 CTSHP09668 335 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 TKFCQ3LXA3 575 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 BARGINQ6ZT62 677 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 RNF180Q86T96 592 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 LDHDQ86WU2 507 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 ANKRD13CQ8N6S4 541 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 OLA1Q9NTK5 396 aaKnown RBP10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 UNC13BO14795 1591 aa10.53□□□□□ -0.72
CLTCL1-211ENST00000621271 RASSF7Q02833 373 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 QRICH1Q2TAL8 776 aa10.52□□□□□ -0.72
CLTCL1-211ENST00000621271 IER5Q5VY09 327 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms