RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 TRIM43BA6NCK2 446 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 VWA5AO00534 786 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 ARHGAP33O14559 1287 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 GPAA1O43292 621 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 DDAH1O94760 285 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 MICAL2O94851 1124 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 NDUFB10O96000 172 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 PGK1P00558 417 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 ZNF865P0CJ78 1059 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 PTGS1P23219 599 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 DGKGP49619 791 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 EPHB4P54760 987 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 DHX9Q08211 1270 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 MTMR1Q13613 665 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 KCTD2Q14681 263 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 LINC01559Q495D7 138 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 SEZ6Q53EL9 994 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 FNDC3BQ53EP0 1204 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 RNF219Q5W0B1 726 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 CXorf57Q6NSI4 855 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 SLC39A5Q6ZMH5 540 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 DPP9Q86TI2 863 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 RIOX2Q8IUF8 465 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 DRC7Q8IY82 874 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 REXO1Q8N1G1 1221 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 LRRC47Q8N1G4 583 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 UBR7Q8N806 425 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 ENAHQ8N8S7 591 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 C19orf47Q8N9M1 422 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 KBTBD3Q8NAB2 608 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 C1orf131Q8NDD1 294 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 PI4K2BQ8TCG2 481 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 ZDHHC1Q8WTX9 485 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 PMEPA1Q969W9 287 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 FERMT2Q96AC1 680 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 TRIM43Q96BQ3 446 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 CCDC17Q96LX7 622 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 STRBPQ96SI9 672 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 MMP19Q99542 508 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 RUSC1Q9BVN2 902 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 LRRCC1Q9C099 1032 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 TTYH1Q9H313 450 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 MROH8Q9H579 483 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 SH2D4AQ9H788 454 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 ZFYVE1Q9HBF4 777 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 PRDM5Q9NQX1 630 aaPredicted RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 AASDHPPTQ9NRN7 309 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 INTS7Q9NVH2 962 aaKnown RBP5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 USP25Q9UHP3 1055 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 PHF24Q9UPV7 400 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 TACC3Q9Y6A5 838 aa5.65□□□□□ -1.5
GAPLINC-202ENST00000579007 MYH7BA7E2Y1 1941 aa5.65□□□□□ -1.51
GAPLINC-202ENST00000579007 TRIP12Q14669 1992 aaPredicted RBP5.65□□□□□ -1.51
GAPLINC-202ENST00000579007 ASTN1O14525 1302 aa5.65□□□□□ -1.51
GAPLINC-202ENST00000579007 BDP1A6H8Y1 2624 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 MICAL3Q7RTP6 2002 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 POTEMA6NI47 508 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 KBTBD13C9JR72 458 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 POTEB2H3BUK9 544 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 PLD2O14939 933 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 EPB41L2O43491 1005 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 STRNO43815 780 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 PRDM1O75626 825 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SLC25A27O95847 323 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 FAM153BP0C7A2 387 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 FCER1AP12319 257 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 ADCYAP1R1P41586 468 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 RPS26P62854 115 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 TLR1Q15399 786 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SHHQ15465 462 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SBK1Q52WX2 424 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SH3PXD2AQ5TCZ1 1133 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SNRNP48Q6IEG0 339 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 POTEGQ6S5H5 508 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 VASH1Q7L8A9 365 aaPredicted RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 ZBTB46Q86UZ6 589 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 CPXCR1Q8N123 301 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SLC17A8Q8NDX2 589 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SNRNP27Q8WVK2 155 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 BADQ92934 168 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 CEP95Q96GE4 821 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SEC62Q99442 399 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SLF1Q9BQI6 1058 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 HERPUD2Q9BSE4 406 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SARGQ9BW04 601 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SPATA9Q9BWV2 254 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 KATNBL1Q9H079 304 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 XPNPEP3Q9NQH7 507 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 ECHDC1Q9NTX5 307 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 OBP2AQ9NY56 170 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 SLC5A4Q9NY91 659 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 HOXC10Q9NYD6 342 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 GTF2A1LQ9UNN4 478 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 VPS9D1Q9Y2B5 631 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 TLR6Q9Y2C9 796 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 DDX49Q9Y6V7 483 aaKnown RBP5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 C5orf42Q9H799 3197 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 NLRC5Q86WI3 1866 aa5.64□□□□□ -1.51
GAPLINC-202ENST00000579007 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms