RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HEATR6Q6AI08 1181 aaKnown RBP5.28□□□□□ -1.56
VTI1B-203ENST00000554636 NUP43Q8NFH3 380 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 BHLHE22Q8NFJ8 381 aaPredicted RBP5.28□□□□□ -1.56
VTI1B-203ENST00000554636 SHDQ96IW2 340 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 FGD4Q96M96 766 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 TOX2Q96NM4 488 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 HAUS7Q99871 368 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 STK31Q9BXU1 1019 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 CHMP4AQ9BY43 222 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 TAF1DQ9H5J8 278 aaPredicted RBP5.28□□□□□ -1.56
VTI1B-203ENST00000554636 PRR13Q9NZ81 148 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 TNFRSF10DQ9UBN6 386 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 FHOD1Q9Y613 1164 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 RTL9Q8NET4 1388 aa5.28□□□□□ -1.56
VTI1B-203ENST00000554636 PSME4Q14997 1843 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SCN9AQ15858 1988 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1B0GUL6 1792 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQ27 194 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQ64 194 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQC6 194 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 A0A1W2PQD8 194 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 IQCA1LA6NCM1 817 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 CCER2I3L3R5 266 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 PDE8AO60658 829 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 EPHX1P07099 455 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 ERCC5P28715 1186 aaPredicted RBP5.27□□□□□ -1.57
VTI1B-203ENST00000554636 CASP7P55210 303 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 CTSWP56202 376 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 GPSM2P81274 684 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 HTRA3P83110 453 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SLC7A5Q01650 507 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 KIAA2012Q0VF49 1180 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 TCEAL1Q15170 157 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 KCNA10Q16322 511 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 GALNT18Q6P9A2 607 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 DPP8Q6V1X1 898 aaPredicted RBP5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SLCO6A1Q86UG4 719 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 LDHDQ86WU2 507 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 JAMLQ86YT9 394 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 NIM1KQ8IY84 436 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 GPC2Q8N158 579 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 DNAJC5GQ8N7S2 189 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 FAM169BQ8N8A8 192 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SUPT20HQ8NEM7 779 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 DNAAF4Q8WXU2 420 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 JDP2Q8WYK2 163 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 JMJD8Q96S16 334 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 PLA2G12BQ9BX93 195 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 VPS33BQ9H267 617 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 MYH16Q9H6N6 1097 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 IMPACTQ9P2X3 320 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SMG5Q9UPR3 1016 aaKnown RBP5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SF3B6Q9Y3B4 125 aaKnown RBP5.27□□□□□ -1.57
VTI1B-203ENST00000554636 SLC12A7Q9Y666 1083 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 MRVI1Q9Y6F6 885 aa5.27□□□□□ -1.57
VTI1B-203ENST00000554636 ZNF646O15015 1829 aaPredicted RBP5.27□□□□□ -1.57
VTI1B-203ENST00000554636 PASKQ96RG2 1323 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 WTIPA6NIX2 430 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 YDJCA8MPS7 323 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 NUDT19A8MXV4 375 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 STXBP3O00186 592 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 ENDOUP21128 410 aaKnown RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 EPHX2P34913 555 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 RPS8P62241 208 aaKnown RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 DLG4P78352 724 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 SRSF3P84103 164 aaKnown RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 NEXNQ0ZGT2 675 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 GCKRQ14397 625 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 DPY19L1Q2PZI1 675 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 CCDC152Q4G0S7 254 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 KIAA1211LQ6NV74 962 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 TMEM52Q8NDY8 209 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 OR6P1Q8NGX9 317 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 TBC1D16Q8TBP0 767 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 KLHL6Q8WZ60 621 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 FCRL3Q96P31 734 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 GPR101Q96P66 508 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 GBP3Q9H0R5 595 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 TMX4Q9H1E5 349 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 ZNF552Q9H707 407 aaPredicted RBP5.26□□□□□ -1.57
VTI1B-203ENST00000554636 CAPN10Q9HC96 672 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 CD320Q9NPF0 282 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 PODXL2Q9NZ53 605 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 POLLQ9UGP5 575 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 HACL1Q9UJ83 578 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 SUGT1Q9Y2Z0 365 aa5.26□□□□□ -1.57
VTI1B-203ENST00000554636 ZNF609O15014 1411 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 E9PSI1 815 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 NUAK1O60285 661 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 MSL3P1P0C860 447 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 HSP90B1P14625 803 aaKnown RBP5.25□□□□□ -1.57
VTI1B-203ENST00000554636 PNLIPP16233 465 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 GLDCP23378 1020 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 TACR1P25103 407 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 ARL4AP40617 200 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 EPS15P42566 896 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 RBM25P49756 843 aaKnown RBP5.25□□□□□ -1.57
VTI1B-203ENST00000554636 LINC00310P59036 64 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 CYP4F8P98187 520 aa5.25□□□□□ -1.57
VTI1B-203ENST00000554636 CXCL9Q07325 125 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms